>PF15252 (228 residues) EVVSQIDKLTSDFDFELEPDDWTTATVSSTSSSDKAGVGGPFDLGHLDFMTADILSDSWE FCSFLDISTPSDSVDGPESTRPGAGPDYRLMNGGLPIPNGPRVETPDSSSEEAFSAGPVK GQPPQRTPGTRERVRFSDKVLYHALCCDDEEGDGEEEAAEEEGGLSPEPPHTEAPAGPLK PSSAPYKPRRSPLTGRRSGPTLVPEQTRRVTRNSSTQTVSDKSTQTVL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | EVVSQIDKLTSDFDFELEPDDWTTATVSSTSSSDKAGVGGPFDLGHLDFMTADILSDSWEFCSFLDISTPSDSVDGPESTRPGAGPDYRLMNGGLPIPNGPRVETPDSSSEEAFSAGPVKGQPPQRTPGTRERVRFSDKVLYHALCCDDEEGDGEEEAAEEEGGLSPEPPHTEAPAGPLKPSSAPYKPRRSPLTGRRSGPTLVPEQTRRVTRNSSTQTVSDKSTQTVL | |||||||||||||||||||
1 | 2pffB | 0.13 | 0.03 | 0.20 | 1.05 | MRFsearch | --------------------------------------------------------------------------------------------------------------------------------------------VIVAGTLDINPDD-----------------DYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------- | |||||||||||||
2 | 5jcss | 0.07 | 0.07 | 0.99 | 1.13 | SPARKS-K | ELTNIVREIISMNMKLSPNATMEGLNLLKYLLNNIVTPEKFQDFRNRFNRFFSHLEGHPLLKTMMNIEKMTEIITKEASVKFEWFDGMLVEKGHWLILDNANLC-SPSVLDRLNSLLEIDGNECSQEDGQPRVLKPHPNFRLFLYIDELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIFAQ--VHDILLLSDEEPIEESLA | |||||||||||||
3 | 5dm60 | 0.07 | 0.04 | 0.64 | 0.70 | DisCoVER | ----YLEKVD--R--------NKQYSIDAAAVK--------------------ELATAETVEVHFRLGIDPDQNV-------RGTVALPHGTGRSVRV--AVITKNVQAAEAGADVVGSDELDAVVATVAVLKAGRIHAPIGKASESGLS------------------A-N--YQALAL--------------EGAKPGTAKGVFLRSAYLTTTMGPSIP--LAL--- | |||||||||||||
4 | 3q3qA | 0.04 | 0.03 | 0.71 | 0.67 | DEthreader | PKLIVAI-S------------------VDQ-FSADLFSE-----------FPRG--HILGSRPIIANNWFDLDAESQPGSSSDKYASPHLRAAIMMGGTADQVWWLGG--YVSYKGVAPTVTQVN-FA-RIQ--------ISIGLSLELGAFFDKLDKD-GIDYVVV---------ATPSPSGP--PESWEARSFYPSRSGDLLLLGSPRETVDISLA---------- | |||||||||||||
5 | 4m8rA2 | 0.08 | 0.08 | 0.97 | 0.48 | CEthreader | RSVVNLQKTYGLCGLAEENGVQQPFFLDFCTGEWKALSFYDYNVIGSGNDIAAIQQRGKGYSLYNVSAGLEQSNYATKTRSNFPPEPQFELPEGFTPEQFGDYPGVFQGNEIILLSARKGNGKWVPLYNYRNGFYVLEGIEADAI------IPFYFGALPDSLLYQKKVGYIYYSSGDNRGSSFRLLEPDKESSKLQLQEPFAQLSDKKVVSITNRLDRIGTITVLFS | |||||||||||||
6 | 5ganF | 0.03 | 0.03 | 0.96 | 0.53 | EigenThreader | SPLQYSKVISILENENYSKNESDELFFHLENKAKLTKISIIAPNVCFLVGPEIAAQLIAHAGIASIGKNKHLSHELHTLESGVRQEGYLFASDMIQKFPVSVMLRMLCAKVSLAARVDAGQNTVLAHKWKAELSKKARKLSE-----APSISETKALVRQLQNRMEFGKQEQTVLDSYGEEVGLGMSNTATSGSRRSAGNQAKLTKVMKHRISEANQQADEFLI---- | |||||||||||||
7 | 4h9jA | 0.22 | 0.09 | 0.42 | 0.36 | HHpred | ------------------------------------------------------------PQSTLKLPHDRGRGNIKT--TLKNLP----GNGGIYVKPGPVFYQ----DYMGPVAPLEFFSEAQFCEVTKGRVTGSDGRLYHIYVCIDGCIKRGEPTRNFTDCPL-------------------------------------------------------------- | |||||||||||||
8 | 2cp5A | 0.15 | 0.03 | 0.21 | 1.00 | MRFsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------SGSSGMSMLKPSGLKAPTKILKPGSTALKTPTAVVAPVEKTISSEKA---------------- | |||||||||||||
9 | 2xd8A3 | 0.07 | 0.06 | 0.89 | 0.41 | FFAS-3D | --ATDKYALLKLFSGEMFKGFQHETIARDLVTKRTLKNGKSLQFIYTGRMTSSFHT--------------PGTPILGNADKAPPVAEKTIVMDDLLISSASATNFVEPGGTQIRVGSGTNESDAFTASALVNAFYDAAAAM--------DEKGPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAAGVVEGPQVQVT- | |||||||||||||
10 | 6ybt2 | 0.12 | 0.12 | 0.98 | 1.06 | SPARKS-K | LFTVAKDPIVNVWYSVNGERDWDTKHVLTGSADETGKQLALLKTNSAVRTCGNIIMFSTFVSFFDLRIDNNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVLVNVKEHSRQIND-----IQLSRDMTMFVTASKDNTDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKGRVKGHFGPINHPDGKSYSSGGEDGYVR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |