>PF15246 (307 residues) SPTIEEKVMLCIQENVERGQVQTKSTSVEAKPKPGPSFASWFGFRRSRLPALSSRKMDVS KTKVEKKDAKGLGFGNKQLKSERKKEKKKPELQCEIENELNRDTELADRPDSGLQSKNNL KTPQDVYGQMKFEPRNRPSPVTCSTKDTFMTELLNRVDKKAAQQTESGSNNVSCRSVLKG SSQGSCLTSSSISTQGNHKKNIKTKADMEIPKGSLIKKANENLQEDEEDTIADSAFQSHI IESNCQMRTLDSGIGTFPLPDSGNRSTGRYICQPESPEDTEPILSLQPALGAASSIRAQT LEREVPS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SPTIEEKVMLCIQENVERGQVQTKSTSVEAKPKPGPSFASWFGFRRSRLPALSSRKMDVSKTKVEKKDAKGLGFGNKQLKSERKKEKKKPELQCEIENELNRDTELADRPDSGLQSKNNLKTPQDVYGQMKFEPRNRPSPVTCSTKDTFMTELLNRVDKKAAQQTESGSNNVSCRSVLKGSSQGSCLTSSSISTQGNHKKNIKTKADMEIPKGSLIKKANENLQEDEEDTIADSAFQSHIIESNCQMRTLDSGIGTFPLPDSGNRSTGRYICQPESPEDTEPILSLQPALGAASSIRAQTLEREVPS | |||||||||||||||||||
1 | 2c1vA | 0.08 | 0.06 | 0.75 | 0.65 | DisCoVER | VFEAI--PE--KMTAIKPLTAEKIELGKVLFPRMSSSGISCQCHNLGGVDGLP--------------TS-IGHGWQKGPR------------------NA--PT-MLNFNAAQFWDAKGPVAGVEMSNQVTIFDNFAAAIEQFEATL-IT--PN-SAFDRFL-------GDDAAMLQAFMETGCTCHYGVNFGGQDYH-----PFGLIAKPGAEVLPDTG--RFEVTRTTDDE------YVFRAAPLRNVALTAPYFWELAEAVKISSAQIGT-ELTDQQAEDITAFL--------GTLTGEQ-P-- | |||||||||||||
2 | 3lggA | 0.06 | 0.04 | 0.66 | 0.67 | DEthreader | -------------PKGAA-L----------------LHDIGIV-T---MDWLVRNVTCICFTIMQFRFA---------HPTPRKWILLYRVFDDSLLRNFT-LVTQPEQVWSKFETIFFTISIHYFPVWSKTYQEVQKFVFIGIKIIVVAGFDLVGHTGHSLDYKEALM---YFF--------INIARIGHGFALSKHP-VSDLRNPATLMATGH-------------------------P--MVISSDDPAMAKGLSDFYEVF----MGIG------GMKADLRTKQAM--IKYSTL--------- | |||||||||||||
3 | 1vt4I3 | 0.06 | 0.06 | 0.97 | 0.67 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 5cqsA | 0.08 | 0.07 | 0.86 | 0.62 | EigenThreader | DVNVVYKSALSL------------------YDVSLALLVAQKSQDPREYLPFLQELQDNEPLRRKFLIDDYLGNYEKALEHLS---EIDKDSEKQNVIYNIYAKHLSSNQYTDAAVAYEAGAYQSAKRWREASFPEEVESVAEELISSLTFEH--RYVDAADIQLEYLDNVKEAVALYCKAYRYDIASLVAIKAKKDELLEEVVDPGLGEGFGIIAELLALVQSVGRLIERLNQTKPDAVRVVEGLCRR-----NREQAHQIQKNFVEVLDLLKANVKEIEIHDFPKSHIVDF-------------- | |||||||||||||
5 | 3jb4C | 0.10 | 0.06 | 0.58 | 0.35 | HHpred | --------------------------------TVRKTKTSKFKWVRNKIDIAE-G-PGA------------MNIANV----LSTTGGQTIALVG---ERAFYDPVRCKDLMEIARMPSVFLGESDGRGYFTWSHTISPVNWVFDENMPNLRLFSSCYNYW------RGSF--VIKLTVYASLRMAFFPNREGAY---------TQDDAQNAIFVVC-----DIGLNNTFEMTIP-----YTWG-NWMRPTRNSLGHLRI------------------------------------------------ | |||||||||||||
6 | 3rauA | 0.10 | 0.05 | 0.47 | 0.43 | MRFsearch | --FLVARISAQVVDYYKEACRALNPDTASLLGRIQKDWKKLVQMKIYYF-----------------------AAVAHLHMGKQAEEQQKFGERQSALDKLNEAIKLAKGQPDTVQDA-------------------------LRFTMDVIGGKYNSAKKDND------------------------------------------------------------------------------------------FIYHEAVPALDTLVKGAPLVKPLPVNPTDPAVT---------------------- | |||||||||||||
7 | 6nuwF | 0.12 | 0.06 | 0.50 | 0.44 | FFAS-3D | ---LEDSVFEKYEKEMNQMTHGDNNEVKRIYSKKERLLEIILTLRQAKFPDIE---YIYSKRQFIQNRY------SQELQNNERLEAILSREQNLLEETRKLCMNLKTNNKKRLTEKLIQKDVRNDSHELNLMLNDPIKSTADVRLDKEVLSLLPSLKEYTKKSKE--------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 7aavA | 0.11 | 0.10 | 0.94 | 1.17 | SPARKS-K | LGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLRFSPIPFPPL-SYKHDILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQ----------RAFKEVG--IEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIK-----PADTEPPPLLVYKWCQGINNLQDVWETSEGEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEAAHP | |||||||||||||
9 | 6gp3A | 0.14 | 0.04 | 0.26 | 0.50 | CNFpred | --PLKSKVAAALMPGFLL----------------YGGFYLPFYLSARKLPNTSDII--------------------------------------LILRDKVIHNYYSGKYQKKVAKLSPE---------------------KQAEMKEFVFKLLYELI----------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5cskA | 0.05 | 0.04 | 0.79 | 0.67 | DEthreader | PE-----------------N----------FRSSSNVWGYFGHIFLTVEYLIKLLET-EKPDPTLAVIADRYKFT-VA-KSGNDRILRK--S----H--LR-VNDKLLGAVVEPLADIKSIHF--YSK-AKNLILAIHYQPLCKLQLPSVKRTFDVLLQFLTHQDP------A-VYIRAYRI--IRVPI----AVDHDVASTLFMYTIPAFLELGRLPYPVKEWLQRYVYDFPEFSFKITVKYGRQF-------KRGIPR--TIAGVEIVEMSPILETKDTWDRPV-DFTPTNETTRTVE-LIQEQR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |