>PF15242 (309 residues) MVTLITEKLQNQSLDDLTCKTYNINLYSSEELNKSGSLFPFEINEENPWKVLNGGCPIRT EVTKVSAFPFPSCPFSSANMCLQWQKESPSPSMVSGWISELNLNENSGQPLAPPPKRHCR SLSEPDELARCRSPWKPGNSKVWTPVSKRRCNSGGSATLQRCNSGGSATLQRSTSISLPQ SVLSLQNVFPVTGFHTSPVPRPSSASSGFVDSSEGSTSSSIRWNSAGPCDFNPRRRLSLS QEHIPEAGNLLPSANSTPTSTPELSRRQGLLRCRSQPCVLNEKKSRLKRRREEDVRWNRP SLDFFKMTR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MVTLITEKLQNQSLDDLTCKTYNINLYSSEELNKSGSLFPFEINEENPWKVLNGGCPIRTEVTKVSAFPFPSCPFSSANMCLQWQKESPSPSMVSGWISELNLNENSGQPLAPPPKRHCRSLSEPDELARCRSPWKPGNSKVWTPVSKRRCNSGGSATLQRCNSGGSATLQRSTSISLPQSVLSLQNVFPVTGFHTSPVPRPSSASSGFVDSSEGSTSSSIRWNSAGPCDFNPRRRLSLSQEHIPEAGNLLPSANSTPTSTPELSRRQGLLRCRSQPCVLNEKKSRLKRRREEDVRWNRPSLDFFKMTR | |||||||||||||||||||
1 | 4g1eB5 | 0.05 | 0.03 | 0.64 | 0.64 | DisCoVER | PVDIYY-----------------------------LMDLSYSMKD-DLWSIQNLGTLRIGFGA--FVDKPVSPYMYIEALENPCY-TTCLPMFGYKHVLTLTDQVTFNEVKSVSRNEGGFDAIMQATVCDEK--IGW--RDASHLLV---------------------------FTTDAKT-----------HIALDGRL----AGIVQPND------GQCHVGSDNHYSASTTMDYPSLG--------------LMTEK-LS-----KNINLIFAV------TENVVLYQNYSELIPGTTVGVLSMD- | |||||||||||||
2 | 5lqwX | 0.05 | 0.05 | 1.00 | 0.61 | CEthreader | NGVYMKFHIGDVDGSFTDIKRLGLKPVSLISVSLNNEEEEEEEEDDDDEKEEEEINSSGAKMSCVVCHSSSTWVSYTWKNVWTIRQLKDQNMLSCSKFVNADVAINGVCSISSSGRLNIGRVSNFPTLDNWFHVHERPRTILSFPNNPKSILFIDNHSGKKQCRISLQIDGECLKFGSSDHLYKILDDIDCVIIDFKRLLTYKKLSFLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLRRSVTQTITKIVSMHQWNYERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDE | |||||||||||||
3 | 3c9vN | 0.07 | 0.07 | 0.97 | 0.67 | EigenThreader | GV----NVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVIELEDKFENMGAQMVKEVASKANLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADAGKPLLIVNTMRGIVKVAAVKAPGLQDIATLTGEDLGQATIIDGVGEEAAIQEKLQERVAKLAGGVAVIKVGAGVVSKLADLRGKVALRAMEAPLRQIVLNCGEEPSVVANTV----KGGDGNYGYNAATEEYGNMIDMGILDP | |||||||||||||
4 | 6u9vA2 | 0.13 | 0.04 | 0.27 | 0.28 | HHpred | HIWMVDQQLLGKSLQDVKGQEVPRPQTDFLELSR-------LSRDSPDWCQCGNCLPSQLRRALEELC---------CR-------RKPGQCITTELFSKIVLSRE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 1vt4I3 | 0.10 | 0.03 | 0.26 | 0.85 | MRFsearch | -----------------------------------------------------------------------------------------------------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------------------------------------------------- | |||||||||||||
6 | 2xd8A | 0.11 | 0.10 | 0.94 | 0.49 | FFAS-3D | ---LYLKLFSGEMFKGFQHETIARDLVTKRTLKNGKSL-QFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTI-------------VMDDLLISSAFVYDLDETLAHYELRGEISKKIGYALAEKYDTRGARSASPVSATNFVEPGGTQIRVGSGTNESDAFTASALKGVSSQGRCAVPRQYYALIQDIGSNGLVNRDVQGSALQSGNGVIEIAGIHIYKSMNIPFLGKYKYGGTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAAGVVEAIGPQVQVTNGDVSVIYQGD | |||||||||||||
7 | 6ybt2 | 0.07 | 0.06 | 0.83 | 1.19 | SPARKS-K | SITQIKYNREGDLLKDPIVNVWYSVNGERLGTYMGGAVWCVDADWDTKHVLTADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTFVSFFDLRDPSQIDNNEPYPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVLVNVKEHSRQSRDMTMFVTASKDNTAKLFTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTARFFHLAFEEEFFGPINSVAFHP-------DGKSYSSGGEDGYVRIH-------------------------------------------- | |||||||||||||
8 | 6rw8A | 0.07 | 0.05 | 0.78 | 0.67 | DEthreader | LHNIVMYLETDIYKATGISPEDQSDISINLSLLYRVLTKIALFS--ALTQLISFLFC-----DN---KPQGLAQHDPTLQALRFRTD---QWLDVAATLGIAGLNS-QQSDQQAWLDTT-ASYIARELYSYLIDNVKTTRV-EA-I-SIQLYVNRALNN-------KVSKPVKTRQFFCDWTY-LIIRIGQTGMMWRNVDHQKCQHGQFAANA-----------SRE---------WFKYEGMGYKKIIYDKSWESAFFYFDEKQFIFINDA-----YKGFI-H-V-V-VMKNNTE------------- | |||||||||||||
9 | 2atyA | 0.09 | 0.08 | 0.96 | 0.88 | MUSTER | ----------DISCGSPPPILNGRISYYSTPIAVGTVISGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWPAPIEKTISKTKGRPKAPQLYTIPPPKMITDFF-PAENYKNTQPIMNTNESYFVYSKLNVQKSNW | |||||||||||||
10 | 6su8A | 0.09 | 0.08 | 0.96 | 0.52 | CEthreader | -------------QIGTIPEVHPKLPTWKCTTEGGCVQQNTSVVLEYLSHPIHEVGNSDVSCVVSGGLNQSLCPEEECSKNCVVEGANYTSSGVHTDGDALTLNQYVTNGDQVVTASPRVYLLASDDEDGNYSMLQLLGQELSFDVDVSKLVCGMNGALYLSEMDASGGRNSLNPAGAQPFINGTVNTGSLGACCNEMDIWEANALATALTPHPCSVTSIYACSGAPGCGYNPYALGDHNYYGPGKTVDTSRPFTVVTQFLTNDNTTTGTLTEIRRLYVQDGNVIGPSPSDSVSSITDSFCSTVDSYFE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |