Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | AKAKAAVESSKQSGSKLEPERNKKEEEKAAKQTKKSVHDVVWDEQGMTWEVYGASLDPESLGFAIQSHLQCKIKEHEKKIMARTTFRKSMSGGASDSPLGRKSKRRQANVFRSMFQNVRRPNCCVRPSP |
1 | 3f8uA2 | 0.06 | 0.04 | 0.70 | 0.64 | DisCoVER | | LKS--EP--IPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCHCKNLEPKYKELGEKLSKDPNI--V--------------I-AKM---DATANDVPS--------------PYEVRGFPTIYF- |
2 | 3ir7C | 0.05 | 0.04 | 0.78 | 0.83 | DEthreader | | LGIFVGHFFGMLTP-------KQKAM-FAGGASVLCLIGGLLRLFS---------TGADILILSLLVIQCALGLL-TIPFSAQHDGEMMKLVGW-AQSVVTFLVLGMLFLLFPSRLIHI---------- |
3 | 2q85A1 | 0.06 | 0.05 | 0.81 | 0.49 | CEthreader | | SAETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQIGGAAVHRALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGEVSAVETIS------------------------- |
4 | 1uyrA | 0.04 | 0.04 | 1.00 | 0.50 | EigenThreader | | SEGMETLKKFDKENSGSEDGLGGLIAGATSRAYHDIFTITLVTCRRAIQVEHLTAVDDLAGVEKIVEWMSYVPAVRWMIEGYGLFDKGSFPANPNSAEGQVWHPNSAFKTAQAINDFNNGEQLPYKQPI |
5 | 3cynC | 0.15 | 0.09 | 0.60 | 0.22 | HHpred | | --PSKEVESFARKYGVTFPIFHKIKSEGEPARSKKEPRKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVIIKKKEDL------------------------------------------------- |
6 | 3p8cA4 | 0.17 | 0.06 | 0.36 | 0.38 | MRFsearch | | ----------------------------------------------------------SVFNHAIRHTVYAALQDFSQVTLREP---------------LRQAIKKKKNVIQSVLQAIRK--------- |
7 | 3zey4 | 0.11 | 0.11 | 0.95 | 0.40 | FFAS-3D | | PHLRKLRKLKRANPSQEEESVELEGSHKTLRAQLPRFRTSSSPRHKKTAMIILYPLRFIMLVRKIQRTLTAELEKRFPGNIVVLVAQRKITKRPNDVYKLQQVQRSRTAVFENILNDLIYPC------- |
8 | 2mq8A | 0.11 | 0.09 | 0.83 | 0.69 | SPARKS-K | | EVEVKITADDENKAEEIVKRVIDEVEREVQKQYPNTITRTLTRDDGTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH---------------------- |
9 | 6ihvA | 0.06 | 0.02 | 0.38 | 0.40 | CNFpred | | -----------------------------------------------LLVLCDGMGAGEVASKFVTDELKSRFEAENLIEQHQAEN-----------------------WLRNNIKDIN---------- |
10 | 6ar6A | 0.06 | 0.05 | 0.98 | 0.83 | DEthreader | | QS-DTLSEGLKELSETSDPLTTTTAIITSSLGIASGFILLVPI-AGIP-LIMVLNPITTRLSQDNVVRKFSILEGINGEILMLDSKPSFGEIKFILDADENDNIQPYFIKTLMIVVVISIEVIVWDFVF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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