Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LTENIGLPLNLLEKHNPWPAYVTYASPVVKKLIEKSKARELECMQALEESRRTLRQNKPLSVIQLKRKKSSKSSGNMLFKDTRSETMLSVWGTCSVSPMGPTVIPEPTHVHTDSRDSPTANYNKIIFARKPMMRMLP |
1 | 6h9cZ | 0.02 | 0.02 | 0.90 | 0.58 | DisCoVER | | QEYTLSHKVTTASNQTQRETAIISFATRFVPRTT-EE--IT--GTANDD--------TVVQLQANIQPIEEDMYPVVVAYNVTVEIVNYADEVTLATDPADGDTVKLWPIMGDGEVQFRTPLTVEVLLDATFEQDV- |
2 | 4bedB | 0.08 | 0.06 | 0.77 | 0.83 | DEthreader | | FKYHIDTVRDVALGGA--EKYTLEYS-AFDPYFMIHHASLDKIWIIWQELQKRKPAHAGSGMHVPLHPFVNNDDFREN----------SLPNAVDSRFNYK----------SGIRTTAVSFVI--LGGAKE------ |
3 | 3gh7A1 | 0.05 | 0.05 | 0.98 | 0.52 | CEthreader | | MATSQPSILPKPVSYTVGSGQFVLTKNASIFVAGNNVGETDELFNIGQALAKKLNASTGYTILTTVGGNAALGNEGYDLITTSNQVTLTANKPEGVFRGNQTLLQL---LPAGIEKNTVVSGVQWVIPHSNISDNWD |
4 | 4ezcA | 0.09 | 0.09 | 1.00 | 0.57 | EigenThreader | | QGYNATLVGILMAIYVFTLPFNMALSMYLSATGLKSLPVGVGQIYGLGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPFEDIYAGLWGFNSSLACIAIGLACALFTAYLGASMSHVMAVVGLPSGTWPFCLATLLFL |
5 | 2pffA1 | 0.16 | 0.14 | 0.85 | 0.42 | HHpred | | -EQGIELEHI------------DSKSEFAHRIMLTNILRMMGCVKKQ-KSARGIETRPAQVILPMSPNHG-----TFGGDGMYSESKLSLETLFNRWHSESWANQLTGAIIGWTRGTGLMSANNIIFSQKEMAFNL- |
6 | 5xe3F | 0.13 | 0.05 | 0.39 | 0.38 | MRFsearch | | ----VRLDQQTRQRLQDYRSANAAIVDAINKRWEALHDEQLDARSAARARRNARQQR-------------------------------------------------------------------------------- |
7 | 7aavK | 0.15 | 0.12 | 0.77 | 0.41 | FFAS-3D | | ---------------NDEEEYEAWKVRELKRIKRDREDREALEKEKAEIERMEERRAELRANGKVITNKAVKGKGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTK----------------- |
8 | 6em5r | 0.10 | 0.09 | 0.98 | 0.87 | SPARKS-K | | LDHEERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKRMITKHTFVGEGFTRRPVKME-RIIRPSALRQKKANVTHPELGVTVLTKGTIIEVNVSELVWGKYAQVT--NEPDRDGCV |
9 | 3qbvB | 0.11 | 0.04 | 0.32 | 0.38 | CNFpred | | --------GDILSAQLHMQPYIRFCSLNGAALIQQKTDEAPDFKEFVKRLAM------------------------------------------------------------------------------------- |
10 | 4g32A | 0.05 | 0.04 | 0.72 | 0.83 | DEthreader | | KLAPAYAPICGQDP---------KTVQVAEEYHEMFVLAQTHLVSEAFCLATQRTLAPPVAPHFETFINGALLQAGNRLGFDF-YRGMLVTASHHGYRQAVF----------------------------YEYLLRI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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