Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | SPNPGVARGHRDQGQASRRWLQEGGQECECKDWFLRGPRRKLMTASGLPKKQCPCDHFKGNVKKIRHRRHHRKPNKHSRACQQFLKQCQ |
1 | 1ki0A1 | 0.02 | 0.01 | 0.64 | 0.59 | DisCoVER | | ----LSECKT---GNGK--------NYRGTMSKT---KNGITCQKWSSSPHRPEG-----LEE-NYC--RNPNDP-QG-PW-CY--TT- |
2 | 3hjaA | 0.05 | 0.04 | 0.84 | 0.83 | DEthreader | | -----AINGFGRGRNVFKAIVLGIDVVIEIL--TVPA----TIVLDHINSDLKAVS-AA-GLVLPL-ILHSSYDFGYSTRVVDLAQKLV |
3 | 1pfjA | 0.09 | 0.09 | 0.97 | 0.43 | CEthreader | | EEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTI---SHMYADIKCQKISQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLL |
4 | 1enpA | 0.02 | 0.02 | 0.94 | 0.52 | EigenThreader | | LRGKRAFIADDNGYGWAVAKSLAAAGAILVHS-----LANGPEVSKPGYLAAISASSGGGMSSAKAALESDTRVLAFEAGRKQNIEYSY |
5 | 4v19P | 0.30 | 0.15 | 0.48 | 0.36 | HHpred | | ----KCGRGHKGERQRGTRLGFEGGQ----TPFYLRIPKYGFNEGHSF-RHQ------------------------------------- |
6 | 6faoA | 0.12 | 0.08 | 0.64 | 0.48 | MRFsearch | | ----------------QGRWFTQGTVRGQVDAFVGAAAAIPILVVYNIPNRDCSGAG----------------GMPNHTAYRQWIDEVA |
7 | 6kr6A1 | 0.11 | 0.09 | 0.84 | 0.28 | FFAS-3D | | -----------DFGQTPKSTFSCKGRDISFVEYYLTKYNIR-IRDHNQPSVVLIPERVNFQLMRAMSSYTRMNPKQRTDRLRAFNHR-- |
8 | 2lhtA | 0.17 | 0.17 | 1.00 | 0.72 | SPARKS-K | | KPDASFCRTAGSREKDCRKDVQAQGRETACKGIREKYKPAVVYGYDGKPLDLGFCTLAGIREVDCRKDAQTCDKKYESDKCLNAIKEKY |
9 | 1w2qA | 0.14 | 0.06 | 0.40 | 0.31 | CNFpred | | -------------------------------------------------TQGCMCEALQQIMENQCDRLQDR----MVQQFKRELMSLP |
10 | 5er8A | 0.01 | 0.01 | 0.89 | 0.83 | DEthreader | | RAHEREY--RGTLSSEISANEFLH-----W--LVTFLHIELCRLMLVITKNDSISLDLRKYDAMLYSISGNVVWLE-CPVSFNTQLEWR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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