Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MSMNANTMIFMILGASIVMAIACLMDMNALLDRFHNYILPHLRGEDRVCHCNCGRHHVHYVIPYDGDQSVVDSSENYFVTDNVTKQEIDLMLGLLLGFCISWFLVWMDGVLHYAVRAWRTSRRYDNSWSWIPKFCNLKELRKRHHRQYEEATGNMVHIKQKLYHNGHPSPRHL |
1 | 6ki1A | 0.06 | 0.05 | 0.94 | 0.61 | DisCoVER | | HFNQGDLFGGVTAAVIAPMALAFGIAGVIVGFFAALFGGTSEPTPMVQAFTVVMMAGLFQIAFGLLKLGAAVLGMLGCALHNSNK-ELVGQGIGNVMSGGGLGGAGATMGTVVNI-QS--GGRTALSGLIRAMVL----LILGAAKLAATIPLAVLAGIAFKVGVDIIDW--- |
2 | 3n8uA | 0.05 | 0.03 | 0.72 | 0.83 | DEthreader | | WNYNVAALLKTDATNLYNAWNSYASLFKA-HSGYASALSC-VEE--IV-DKCAEISIAYLSVIANSLDT-IILKNDKSYIANNNNINTAVLNPVVTQYVDVVVPTYLPWVLDPNDSWPLDIDLE--------------------WSEGDD----------------------- |
3 | 4jkvA2 | 0.08 | 0.08 | 1.00 | 0.41 | CEthreader | | PTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPGKTSYFSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFHFYDFFNQAEWERSFRDYVLCQANCEIK |
4 | 3jacA | 0.05 | 0.05 | 0.87 | 0.62 | EigenThreader | | ------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 2d0tB | 0.14 | 0.09 | 0.64 | 0.30 | HHpred | | ----------DTLLKALLEIASCLEKALQVFHQIFSVLRIYLSGWKGN-P--QLSDGL----VYEGFW---EDPKEFAAGQSSVFQCFDVLLGIAAQFL-------------QDMRRYMPP-AHRNFLCSLESNPSVREFVLSK----------------------------- |
6 | 3orgA | 0.10 | 0.05 | 0.54 | 0.35 | MRFsearch | | --LLRLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISRLA--------------------------------------GRFAGYILYVVSGVALCLLSTFWCAVLSPQMKSILSGF---------YDKMRSALELRVLFAK------------------------------ |
7 | 4od4A1 | 0.11 | 0.07 | 0.62 | 0.52 | FFAS-3D | | -PFTLADAILMAAAVVGLRMAGMAY--NNIADL-------------------------------DIDRLNPRTAKRPLVVGAVSLREAGSAIYFASAALLNTYALLLSPLVLAIALTYPHAKRLHPLPHLHLGIVSLGEVLR------------------------------- |
8 | 6djyB | 0.11 | 0.11 | 0.96 | 0.63 | SPARKS-K | | PRAGVTQLKSLLTQLADPLCLALDGHVYHLYNVMANNFIPNTDGQ------FHSFRACSYAVKDGGNIYRVVQNGDELNESLLIDTAIVWGLLGNTTPTIHLKTSIDAICSVEGILLLTTIPGYEDELNKLRTGIQYRRARESIKNMLGSGDYNVA-PLHFLLHTEHRSTKLS |
9 | 4bocA | 0.11 | 0.08 | 0.72 | 0.68 | CNFpred | | FVWEASHYLVRQVFKSLQEMFSGTRAIQHWLTESARLISHMG----SVVEWVTP-LGVPVIQPYRLD-RKPN----------TRKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSV----DCYWTHAADVSVMNQVCREQ----------------------------- |
10 | 5td8A | 0.06 | 0.04 | 0.72 | 0.83 | DEthreader | | ---VGGSNWHKFLGMLHWMVRTNIKLDMCLNKVDRSLINQNTQMVKLLID-------FTESELGKFHIINTDVTSTELKLEELKVDLNRKRYKLHQQVIHVIDITSKFKINIQSSLENSENELGNVIEELRN-LE-------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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