Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RSGPANELHIRLEECYEQWRALEKERKKTEAELARNFPGKRVSSSNNTPIPRLPSNPSRVDRLIVDQLREQARVLTLLGKMERLRSSPVHANISSTLNCHLEAIHVTQARRKDEIINAANRQRQGAPRYNDDKDVLALAAAIKDLTMSTRKARTALWCALQMTLPK |
1 | 2qgaC | 0.08 | 0.07 | 0.92 | 1.17 | DEthreader | | AFFSEALCLACLDVVIPCLEKIMLKLKDLAVEYSHVPLSTKEMNF--RIHHVI-RVKVYICELCDGLARANGTLIDLCVDIWLYISNKLVGVNPIDFENAEGNLHIANAFFKLFSSKLPTS--L-----SDSTVLRNIGSSLAYCLIAYKSVLKGLNKI--DIDR- |
2 | 3nz4A3 | 0.05 | 0.05 | 0.96 | 1.10 | EigenThreader | | TSFATALASTVMYDANVLLLLVETLCGMFCEVIFYYSIDKDRYALRSGANFQGSAVGFYMDYVRIAVAGLGKLLFAQFTELMILSLDYGLKGLDIAMAAYSSELQYLANPVTTHV------HSAEQHNQDINSLALISARKTDEALDILKLMIASHLTAMCQAVDL |
3 | 1q5nA | 0.05 | 0.05 | 0.90 | 1.17 | DEthreader | | ADILDTACILQCRDALAIVQNQVQQCYETALSQAQTYRHTGHKRWSA--D-----ERDRIVEIASVLGIITGNVGKMARDWSLMMEVFENPVAAASVLAAANRVPALMSSIYQSM-VQ--E-----HERSL-GAWHAEWLSLPEIFQLTAGALERTLDVLKGMEVN |
4 | 2qgaC1 | 0.08 | 0.07 | 0.92 | 1.17 | DEthreader | | AFFSEALCLACLDVVIPCLEKIMLKLKDLAVEYSHVPLSTKEMNF--RIHHVI-RVKVYICELCDGLARANGTLIDLCVDIWLYISNKLVGVNPIDFENAEGNLHIANAFFKLFSSKLPTS--L-----SDSTVLRNIGSSLAYCLIAYKSVLKGLNKI--DIDR- |
5 | 5vkwA1 | 0.05 | 0.05 | 0.91 | 1.17 | DEthreader | | CFVTDNADLIFLRDAYDVLIPKLVNVIDRLSKFALEYKDTKATLWQE-WD-----SRKIDIDVLSPLASFGATAHKFATDIRLLANERNPMRCERVCSLARH-LGGLFNDAVQTASVQ--W-----FERTL-DDSAIRRISLPSAFLTVDILLSTMLNITSGLVVY |
6 | 5ebzA3 | 0.07 | 0.05 | 0.71 | 0.71 | DisCoVER | | VNYIVQDSKI------------------------------------------QLPILRVWAEAVHYVSGLKEDYSTLISASQQLKAKLYA--EVGVIPYGRRQGDLMESLEQRAIDLYKQLKDHSYSDS--TEMVKIIVHTVQSQDRVLKELEVALSNIKEADV-- |
7 | 3nz4A | 0.08 | 0.07 | 0.93 | 1.17 | DEthreader | | ATVLASTVMYDANVLLLLVETLCGMFCEVIGQLSRYYKKPQDRYAL-SQWAPLQTRDATMYVRIA-VAGLGKLLFAQFTELMIEPGNLSDYGLKGLDIAMAAYSSELQYLA-NP-VTT-V-------NSLALISARKTDEALDILKLMIASHLTAMCQAVDLRQEE |
8 | 5mskA | 0.05 | 0.05 | 1.00 | 0.70 | CEthreader | | SGEARKQVDVFRQNLFQEADDFLCFLPRKIISLSQLLQEDSLNVADLSSLCGYLPGNEKLLALLALVKPEVWTLKEKCILVITWIQHLVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASKDTHVMDYRALVHERDEAAYGALRAMVLDLRAFYAELYHIISSN |
9 | 6ig5A2 | 0.10 | 0.10 | 0.96 | 1.00 | EigenThreader | | NDQVAALFRMWLRDAVRRVATGVLDVVGALAEQAAAHPSAYGSGALAGSSLGLDFSRDFAAEAAFVFAMIAVDLSRLAEDIIVWSSTEFHDSWSDIAELARGKSGRLIGNLAGLLATLK------AQPLAYNRDLQEDKEPVFDSVAQLELLLPAMAGLVASLT-F |
10 | 5dfzD | 0.12 | 0.11 | 0.93 | 0.31 | HHpred | | --SDQNLMDLNNIQFNKNLQSLKLQYELSLNQLDATFKG-PFATINGLRLGSIPESV--VPWKEINAALGQ--LILLLATINKNLKINLETKFDKSLETTLEIISEITRQLSTIASYSELPYINGLVKLHGSPNL-EWTTAMKFLLTNVKW--LLAFSSNLLSK-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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