Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LVCVAISLLISCQPSEAWYKQATGPSYYSVGRASGLLSGIRRSPYIRRSESETGTETGDTTGNNLVSEPRQTAILKSMAICVKDISPNLQSCELLQDGMNTFQCKADVYLSLDSQDCM |
1 | 2khcA | 0.01 | 0.01 | 0.58 | 0.81 | DisCoVER | | --LSAAAAAAA---------------GKQIEGPE-GC-------NLFI---------YHLPQEF----------TDTDLAFLP-F---GNVISAKSKCFGFVSFDNPDSAAIGFLKV- |
2 | 2ze9A | 0.05 | 0.04 | 0.87 | 0.83 | DEthreader | | -A--LQTPGAGTRRLLDKMTRNIVDISKLLV-------TAITGGINGWDYLDTAHP-ANRYSISFRDAAKWAKPYALHHKLVSVDDSAFYIGKNLYPA---DFGYIVAALKLLEWSQ- |
3 | 6vxkB1 | 0.07 | 0.07 | 1.00 | 0.64 | CEthreader | | VWRSEQAIGAIAASQEDGVFVASGSCLDQLDYSLEHSLSRLYRDQAGNCTEPVSLAPPARPRPGSSFSREGAAGLGGLLLTGWTFDRGACEVRPLGNLSRNSLRNGTEVVSCHPQGST |
4 | 5m5iC | 0.05 | 0.05 | 0.98 | 0.65 | EigenThreader | | NETNIQEVRDNSSLAVSTSGAM--GAELAIQSDPSSMLVTKTYDKVFGPEADGQTGTGKTYTMSGDLSDSDGILSEQEYAVKCDLLVKPARVFEDTSRRGNVVITGIEESYIKNAGDG |
5 | 3mwzA | 0.16 | 0.13 | 0.78 | 0.30 | HHpred | | --------------RGGYRERSNDPEYLEAHYATSTWSAQPGKTHFDKVETQT-----VAGTNYR-----LTL-KVAESTCELTSTYNKDTCQANANA-AQRTCTTVIYRNINSFECA |
6 | 2pffB | 0.20 | 0.03 | 0.17 | 0.60 | MRFsearch | | -------------------------------------------DYGFKQGGGGGGGGGGGGGG------------------------------------------------------- |
7 | 4rg1A1 | 0.16 | 0.14 | 0.86 | 0.26 | FFAS-3D | | VQLARILQYLECPQ---YLRKAFFPKHL---QFAGLLNPLDSPHHMRQDEESEFREGIVDRPTRPGHGSFVNCGMKKEVKIDKNLEPGLRVTVRLNQQQDCKTYHGKV---------- |
8 | 6g43A | 0.11 | 0.10 | 0.95 | 0.82 | SPARKS-K | | PAQLIKLHQYNADPELALLSPCSDVDEYNK------IKAVSNNPYRQGTESTDSRSRGCNYAYYIHPRAAGSTSVKIDFVVDEALVANPTQYKNIKDPVPFRNLKVILDGQFKPENIG |
9 | 4yboA | 0.11 | 0.03 | 0.31 | 0.64 | CNFpred | | YFSGIVYMSIGFPLRNNIYTA-----LFALSRVTGWQAHFI----------------------------------------------------------------------------- |
10 | 3d6yA | 0.07 | 0.05 | 0.75 | 0.83 | DEthreader | | SIGEVSKLANDLIHLDLIKSLK----YI-----------------PLEEMKAFEQQIEKFLLQTIVRMRQMEYPALGEVILYIALTVVSDVYELIIIEYRVEMKIEILD--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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