Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | YMQVETRTSSRLHLKRAPGIRSWSLLVGILSIGLAAAYYSGDSLGWKLFYVTGCLFVAVQNLEDWEEVVFNKSTGKVVLKTFSLYKKLLTLCRAGHDQVVVLLSDIRDVNVEEEKVRYFGKGYVVVLRFATGFSHPLTQSAVMGHRSDVEAIAKLIATFLELHRLESPAELSQSSDSEADDPG |
1 | 6f8eA | 0.10 | 0.06 | 0.61 | 0.67 | DisCoVER | | ------RMKVMYRRALTKV-VK--L------K-------------------T--HL--FSETVKVTCSKD-G--E-E-VQWFKGKST--AGAQDRKPSGGFPVDKITSVKSQ------ADNTKVLVITVNNPQPTTYNFTFKSP-G-ERESWQEQIQSLMKFM---SM--------------- |
2 | 3w6qA | 0.08 | 0.07 | 0.86 | 0.83 | DEthreader | | IRKDI-------DDWYQLFVALTILSYLAGIHGWGTGFCVHNNYTFPTWHRVYVTLYEV-----PYWDRFARHGDELRLPVYRF-F-TTKYGDGGQNWLNLNVPTLQMTLLFSS---------NLEAIH--NNVHNHHIDRAVWRSYDYAIT-IEISDLYGQRTVYEDYILSIGSVVSVVEVK |
3 | 1x05A | 0.09 | 0.06 | 0.70 | 0.54 | CEthreader | | -----------------------------GSSGSSGVILKEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPA---------GAEDPLGAIHLRGCVVTSVESNSGRKSEEENLFEIITADEVHYF----LQAATPKERTEWIKAIQMASRTGKSGPSSG------------- |
4 | 1mu2A | 0.08 | 0.07 | 0.94 | 0.68 | EigenThreader | | DVIIIQYMD-DILIASDRTDIQKLVGVLNWAAQLYHLCRLIWTELAEAELEENRIILSK---ELEATVQKDQDNQWTYKIHQEEGKEALVIWGRIPKFHLPFVSAETFYTDGSCN--RQSKEGKAGYVTDRGKDKVKKLE--QTTNQQAELEAFAMALTD---SGPKVNIIVDSQYVMGIVAS |
5 | 4chjA | 0.09 | 0.05 | 0.54 | 0.43 | HHpred | | -------------------------------------------EAFDN-WMN-RYEAGDEVFRIECNLKIDRPKNFMNLTF-------------NQKVRPIQLDDIAAVLYGSKML--RNP--VVGFLASSGRAIAFSFK----DITDAQCFVSFLDDEIKKNQE------------------ |
6 | 4hw9A | 0.15 | 0.10 | 0.67 | 0.63 | MRFsearch | | --------------------VAQVTFILILIITTIIALSTLGVQTTSIITVLGTVGIAVALALKGDIIEIS--GLEGKVEALNFFNTSLRLH--DGRLAVLPNRSVANSNIINSNNT-ACRRIEWVCGVGYG--------------SDIELVHKTIKDVIDT--------------------- |
7 | 4ifsA | 0.11 | 0.07 | 0.57 | 0.52 | FFAS-3D | | -----------------------------------------------LYEMVSRVMKALVNRKITITCSYKASSGLLYPLERGFI-------YVHKPPVHIRFDEISFVNF--ARGTTTTRSFDFEIETKQGTQYTFSSI--------EREEYGKLFDFVNAKKLNIKN-------------- |
8 | 3rfbA | 0.09 | 0.07 | 0.77 | 0.68 | SPARKS-K | | ----------------------SEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVLGPFQLGKGVCGEAAHFQETVIVDVTLAKSEIVVPMMKN-GQLLGVLDLDSSEI------EDYDAMDRDYLEQFVAILLEKTTWDFTMFEE-------------- |
9 | 3pvlA | 0.13 | 0.10 | 0.73 | 0.67 | CNFpred | | -------------------LEKWAQLAIAAHKKGIYAQRRTDSQKVKEDVVNYARFKWPLLFSRFYEAYKFS-KSDVIVAVNW--TGVYFVDEQEQVLLELSFPEIMAVSSSRGTK---MMAPSFTLATIKGDEYTFTSS----NAEDIRDLVVTFLEGLRKR-------------------- |
10 | 6a69A1 | 0.09 | 0.07 | 0.77 | 0.83 | DEthreader | | VT--LSFIIGTVVVPEGLLAVTISLA-SVKMMDNNLVAMGITDDNTSIVKAVMWGRNVYDSISFLQNAVVAGAISPL-V-M---YKPLISRTMKNILAQLVFLLHYTIV-----------------FNTF-VLMQLFNEF-TI--T--VQ--IV--GKP-FS-CSELSIEQWLWSFLG----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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