Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KELVDAAEKWCTGNPFDLIFAEDVDERRLDFYAEPGISFYVLCPDNLTGGTDNFHVWSESEDCLPFLQLAQDYISSCGKKTLLEVLDKVFRSFRPLLGLPDIDDDTFDQYHADVEEEPEPDHQQMGVSQQ |
1 | 2dxqA | 0.10 | 0.05 | 0.53 | 0.64 | DisCoVER | | ---------------AISLRAALAQPGLTIFVATEPVATATLLIVPNRARPYAFIENVVTLYGRTVVRHAI--------ETAF-------------------------------------ANCYKVLLC- |
2 | 6bqiA | 0.11 | 0.08 | 0.79 | 0.83 | DEthreader | | HQLVEELEAVEAIYPDLLSKKQED--GSIIVVKVEYMTLQISFPTHY---SEEPNVIEVGTYLQHLFQEVMDSVF--HRGS-VC-LFDFLTELDGVLYV-P------TD-PFEGWVAFAM---------- |
3 | 4i8oA | 0.11 | 0.11 | 1.00 | 0.62 | CEthreader | | ANIETESRQFIENKNYSIQSIGPPAGLRVVFTRPGVNLATVDIFYNGDGSTTIQYLTGANRSLGQELADHLFETINPAEFEQVNVLQGFETSVLPVLELSADESHIEFREHSRNAHTVVWKIISTSYQDE |
4 | 2mt6A | 0.08 | 0.08 | 0.97 | 0.73 | EigenThreader | | QKELLALQNDP--PPGMTLNEKSVTQWIVDMEGYEGEKFQLLFKSSRYPFDSPQVMFTGEPHVYSNGHICLSILTEDWSLSVQSVCLSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC-- |
5 | 2qm4A | 0.21 | 0.15 | 0.70 | 0.25 | HHpred | | ------LEQGLL-QPWAWLQLA---ENSLLAITKQGYALLVSDLQ---------QVWHEQVDTSVVSQRAKELNKRLT-APPAAFLCHLDNLLRPLLKDAAHPEATFSCDC------------------- |
6 | 3vz9B | 0.11 | 0.08 | 0.67 | 0.60 | MRFsearch | | --LCKSKELFEERLGLEIRRIHN-EQLQFIFRHIKPYMFTLSINE-----QGDYEVTSCTP-PLDCISEFQLKVRET--NNFSAFIANIRKAFTALSF-------------------------------- |
7 | 1w63M1 | 0.10 | 0.08 | 0.87 | 0.49 | FFAS-3D | | EHFMPILMEKEEEGMLSPILAH--GGVRFMWIKHNNLYLVATSKKNACV-------SLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMGYPQTTD------SKILQEFITQEGHKLETG-- |
8 | 2l69A | 0.15 | 0.12 | 0.85 | 0.58 | SPARKS-K | | EETLRKFKDIIKKNGFKVRTVRSPQELKDSIEELV------------KKYNATIVVVVVDDK--EWAEKAIRFVKSLGAQVLEEFSREVRRRGFEVRTVTSPDDKSLERLIREVGSLEHHHHHH------ |
9 | 2qm4A | 0.16 | 0.12 | 0.78 | 0.55 | CNFpred | | -SGMEELEQGLLMQPWAWLQLAE-NSLLAKVFITQGYALLVSDL---------QQVWHEQVDTSVVSQRAKELNKRL-TAPPAAFLCHLDNLLRPLLKDA-----------------AHPSEATFSCDCV |
10 | 6bqiA | 0.12 | 0.09 | 0.78 | 0.83 | DEthreader | | VEELEAVEAIYP---DLL-SKKQDGSIIVVKVPHEYMTLQISFPTHYPS-EEAPNVEVGVRYDTYLQHLFQEVMDSVFHRCLFDFLTELDGVL-YV-P--QSDIP--TDPFE--T--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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