Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LPLLLLLVVVVIAWPLAVQSAPPTCYSRMLTLSREIMADFQSLQASEPEDSCVRYLPRLYLDIHNYCVLAKLRDFVASPQCWKMAEVDTLKDRVRKLYTIMNSFCRRDLVFLSDDCSALEDPIPEATG |
1 | 5ijgA | 0.14 | 0.11 | 0.77 | 0.71 | DisCoVER | | PTNSTLLGPVFYVGGHTLGLRMERADSNAIAGSTFS--FD--I--KGGQAAAFRFLNALQILGTE-SL--AS--HPAAMTHSVL-ES--TI-RL--S---I-------GIEHPDLIADLAQ-ALDA-- |
2 | 4wd7A | 0.07 | 0.06 | 0.88 | 1.00 | DEthreader | | ------------NSASYS--RF-VEARNLWGTVLIAERTLVRQLRLEAHRRIVSYLVAFSWLKLRKTPMPTNRILLLGNEIGQLYLMDNKLDELAHVLGGCERLATTPEDPFGTPLNAMCNENLLTGQ |
3 | 4j6sB | 0.05 | 0.05 | 1.00 | 0.54 | CEthreader | | GARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYY |
4 | 4jr8A | 0.04 | 0.04 | 1.00 | 0.63 | EigenThreader | | WLGTAGMFLGMLYFIARGWGETDSRRQKFYIATILITAIAFVNYLAMALGFSDWLFTTPLLLYDLGLLAGLDVLMIGTGLVATLSISTAFLLVLLYFLFSDTRSTFKTLRNLVTVVWLVYPVWWLVGT |
5 | 2qg7D2 | 0.13 | 0.09 | 0.66 | 0.25 | HHpred | | --------------------------IKNPKFQKLIAKNLKLLHDIKLNEN-LYRPSFLW---------NTIWKYFHEENILKLIDFDVLRDSIVEVESLCKVLCHCDLLINTVGISFIDF------- |
6 | 5oklA2 | 0.16 | 0.14 | 0.89 | 0.32 | MRFsearch | | ---LGKDGLKYHYLIRLTKIAPQLSTEELVSLGEKMVTAFTTCCTLSEEFACVDNLADLVFGFRRPCFESLKADKFHADMCQSQNEDEELQSLFTNFANVVDKCCKAE---SPEVCFNEE-------- |
7 | 5cwpA2 | 0.16 | 0.12 | 0.77 | 0.54 | FFAS-3D | | --ALKLIVEAIEAAVRALEAAERTGDPEVRELARELVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKAR-ERVREAVERAEEVQ--------------------------- |
8 | 5cwiA1 | 0.12 | 0.10 | 0.84 | 0.59 | SPARKS-K | | --------------------DIEKLCKKAESEAREARSKAEELRQRHPDSQAARDAQKLASQAEEAVKLACELAQEHPNADIAKLCIKAASEAAEAASKAAELAQRHPDSQAARDAIKLASQAAEAVK |
9 | 2olcA | 0.11 | 0.09 | 0.82 | 0.58 | CNFpred | | GPIGFDVGQFIANLFLNALSRREPLYEHVNQVWETFEETFSEAWQKDSLDYLTDTLSHIFEEAIGFAGCELIRRTIHVADLDTIVPFDKRIGRKRLALETGTAFI----------------------- |
10 | 1ml5Z | 0.04 | 0.03 | 0.74 | 1.00 | DEthreader | | ----I--NPVNNRIQDLTERVLRGY-LDYDAKKERLEEVNAELEQPDVW--G--RS--EDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFR-------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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