>PF15146 (440 residues) KVGQKIKELLSGIGNVSERVSFLKKAVDQRNRALTCLNEAMNVSCALLSNREGPKPISCT TTTAWSRFQLRDVLTATCLLENSSDYSLDQGWTFCIQVFTSSCALEVDSVGSAITYTIPV DQLTPGSKREVTLPLGSNENGKLDLPVTISCALFYSLKEILGSALTSSDSLDAPFFDDCP PDILPDRDGIFLPLGEYTVDMLQCLRFPSLAVAEVQVPGLPSPTSDPVKTFLEASRGQVD PEHMKNIEPMGPDFLRAKYLPPSVASVKVSSELLKNALKEYCSEVPLCCATLQWLLAENS IVDIVKTQVLTEVQGVAPDGNDIHLLVREVAVTELCPAGPIQAVEIQMESPSLANMCRVH HAVIRRIQVMIMEQAAQGSNPPDLRVQYLRQIHANHEMLLKEVQLLRDRLCVEDDASASA AAEKLLQVYKQLRNPSLILL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KVGQKIKELLSGIGNVSERVSFLKKAVDQRNRALTCLNEAMNVSCALLSNREGPKPISCTTTTAWSRFQLRDVLTATCLLENSSDYSLDQGWTFCIQVFTSSCALEVDSVGSAITYTIPVDQLTPGSKREVTLPLGSNENGKLDLPVTISCALFYSLKEILGSALTSSDSLDAPFFDDCPPDILPDRDGIFLPLGEYTVDMLQCLRFPSLAVAEVQVPGLPSPTSDPVKTFLEASRGQVDPEHMKNIEPMGPDFLRAKYLPPSVASVKVSSELLKNALKEYCSEVPLCCATLQWLLAENSIVDIVKTQVLTEVQGVAPDGNDIHLLVREVAVTELCPAGPIQAVEIQMESPSLANMCRVHHAVIRRIQVMIMEQAAQGSNPPDLRVQYLRQIHANHEMLLKEVQLLRDRLCVEDDASASAAAEKLLQVYKQLRNPSLILL | |||||||||||||||||||
1 | 5a1uE2 | 0.05 | 0.03 | 0.52 | 0.93 | DisCoVER | ----------------------------------RQEIFQPEFQGLGPLF-----KSSPEPVALTESETEYVIRCT-KHT-------FSDHLVFQFDCTNTLNDQTL---ENVTVQMEAYEVL------SYVPARSLPYNQPGTCYTLVAVACTFSCVM---------KFTVKDCDPNTGEIDEDEYDLEVTVADHIQKVMAWDVGDEFEKEETFTLSTIKTL-----------------------------------EEAVGNIVKFLG------------------------MHPCERSDKVPENTHTLLLAGVFRG-GHDILVRSRLLLLDTVT--MQVTARS-SEELP---------------------------------------------------------------------------------VDIISV- | |||||||||||||
2 | 6rc9A1 | 0.08 | 0.05 | 0.61 | 0.67 | DEthreader | GIYYEQLQRGLGL--M--LKVKVQLKADFGPTPWR----------------------P-TWTPKWWARQTTGFNPHWAANGGNGHVKSAH-A-LSIGV------TGW--ALLFSMVTGL--------VAGAK------------LVLAGTITMGDTTVPDQWQVYNWSNK-------------SADFVNENAYQP-SL----LDQVLDYGNHRSFLGVGTGAGWR--------------TNYTNLPPNLADWPNALSFTNNAQRQLIPVLSGLVETYFGNTRAGSSSP--PGL-W-------------------LGGWLVTF--------------YLG--------------------------P---------------DLKGVWADQA-QSDSQGSTTTATRNALAFQ-VTQSDKLDDDLKNLLDPNQVRTKR---D | |||||||||||||
3 | 1pzdA | 0.11 | 0.07 | 0.62 | 0.93 | CEthreader | --------------KVAATRQEIFQEQLAAVPEFQGLGPLFKSSPEPVALTESETEYVIRCTKHTFT----DHMVFQFDCTNTLNDQTLENVTVQMEPS----------EAYEVLCYVPARSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPTTGEA----------------DDEGYEDEYVLEDLEVTIADHIQKVMKLNFEAAWDEVGDEFQKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTHTL------------------------------------------LLAGVFRGGHDILVRSRLLLLDTV-------TMQVTARSSEELPVDIVLASVG---------------------------------------------------------------------------- | |||||||||||||
4 | 1y1uA | 0.07 | 0.05 | 0.75 | 0.75 | EigenThreader | LQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQLAGNGGPPEGFIIEKQPPQVL-KTQTKFAATVRLLVGGKLNVPPQVKATIISEQQAKSNENTRNECSGEILYHQ----ATGTLSARNMSLK-RESVTEEKFTVLFESQFSV--------------------------GSNELVVKTLSLPVVVIVVLWDNAFAEPGRVPFAVPDSNRGLTKENLVFLAQKLFNIS----SNHLEDYNSMFNRENLPGW------NKKHHKPHWNDGAILGFQQAHDLLIN----------KPDGTFLLRFSSEIGGITIAWKFDSPDRNLW-------NLKPFTTRDFSIRS-------------------------------------------LADRLGDLIYVFPDRPKDEVFAKYY--------TPVLAK | |||||||||||||
5 | 1pzdA | 0.16 | 0.09 | 0.57 | 0.30 | HHpred | -------------------------AATRQEIFQEQLAAVPEFQGLFKSSSETEYVIRCTK------HTFTDHMVFQFDCTNTLNDQLEN---VTVQMEPSE-AY-------EVLCYVPARSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPTTGE----ADDEGYED------------EYVLEDLEVTIADHIQKVM-K-------------LNFEAAWDEV-----------GDE------------FQKEETFTLSEEAVGNIVKF-----------LGMHPCERSDKVPDNNTHTLLLAGVFRGGHDILVRSRLL--LL---DT--VTMQVTARSSEEL-PVDIVLASVG--------------------------------------------------------------------------- | |||||||||||||
6 | 1pzdA | 0.14 | 0.07 | 0.54 | 0.70 | MRFsearch | ----------------------AATRQEIFQEQLAAVPEFQGLGPLFKSSPETEYVIRCTKHTF------TDHMVFQFDCTNTLNDQTL--ENVTVQMEPS--------EAYEVLCYVPARSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDC---------------------------YEDEYVLEDLEVTIADHIQKV--------------MKLNFEAAWDEVGD-----------------------EFQKEETFTLSEEAVGNIVKFLG-------------------MHPCERTHTLLLAGVFRGGHDILVRSRLLLL-------DTVTMQVTARSS------------------------------------------------------------------EELPVDIVLASVG---------- | |||||||||||||
7 | 6sihA | 0.09 | 0.07 | 0.81 | 0.79 | FFAS-3D | LTQDTIDKLKEAIDPYTKKIEENTTKQKDLTEIKTKLLSFQTAVSSLVGSISDNPPASLTVNSG----VALQSMNINVT-------QLAQKDVYQSKGLANDSGFVNANLTGTTDLTFFSN----GKEYTVTVDKNTTGEKGTPYRLTLTSAISFYIFSNLGTQTIDPAKDKKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNLTLNKTGEINFDVQQDFEGVTKAMQDLVDAAATDYNSETGTKGTLQGISEVNS------------IRSSILADLFDSQVVVMLSMQDF---------------------------G---------LSLNDAGT--------LSFDSSKFEQKVKEDPDSTESFFSKLKATLQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMI--------DTRYDTMANQWLQYES------ | |||||||||||||
8 | 4fyeA | 0.10 | 0.08 | 0.80 | 0.63 | SPARKS-K | KKSSANKDFLEQLAKVEGSLQQFTQAVAKASGHLKALDKEGHNIRSHN----------------------RDTLIHRFKAPNS-----KEGEEQFIMYIPC-------GRYTKRQQRLMGKDLVLGNSMARMIAGTRHSDGT----VTIHHDSFSGPGARMP----------YSDFKGADDYKKLAIKAVTLINQEEVIQTLAQRQIDRMTNPEEYRPDELPDAEKARAQLIKLYVEHNPLS--------------------VTECYTQV---VTAGQRVAAENQKEQFEYVRQMMDAFDGSK-------AKITIQTGSNTAVGYQARMSSFRQVGALNPLS---------DNSVTKNQNARFVNQMTDDVIRNLDKVANLGDYKAGALHTLLKVKGAYREALFSYFEEYQKGEGKSIKKQESAIYELHNQIDALRKAYY | |||||||||||||
9 | 5goeA | 0.13 | 0.09 | 0.73 | 0.76 | CNFpred | LAKKAITAIFDQLLFVTEGSHFVEATYEDDLVEMQGYKDKLSIIGEVLS----RRHMKVAFFGRTSS---GKSSVINAMLWD---KVLP-NCFLSVEGTDG-AYLMTE----GSDEKKSVKTVN-GCLVRVFWPKAKC---LLRDDLVLVDSPGT-IDKFCLD-----------------------ADVFVLVAN-----SESTLM-------------------NTEKHFFHKVNERLSK--------------------PNIFILNNRWDASASEPEYMEDVRRQHMERCLHFLVEELKVVNALEA--NRIFFVS---------AKEVLSAR--------------LAEGFHARLQEFQNFEQIFEECISQSAVKT---FEQHTIRAKQILATVKNIMDSVNLAAEDKRHY-LPKEIDQLEKIQNNSKLLRNKAVQLE | |||||||||||||
10 | 1jqnA | 0.07 | 0.04 | 0.62 | 0.67 | DEthreader | -----------------------------------------------------------NVL-L-IALDLPRASQNLTAYHSGEAASNP---------HTEITRR-----TLIHKVEACKQLDN----LMLLIQSHTDEIRKLRPEWAVNSQGPNYRE-EQ------LVSELSRLMKLRLM---NGDLLDTRR------------------------SAETREVT---VISMAPLFEAVMTQLIWYRIQGKIKTCEELTLFHGRGGGQ----------------------------IMDELSVISCDVYRGYVRNKDFVPYFRGVESL---------------RAIPWI-----FAWTQNRLMLAWMVFAKILADHLMADLP-WIAESIQLRNIYTDPLNVLQAELLHRSQAEGQEPDPRVEQALMVTIAGIAAGMRNTG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |