>PF15139 (192 residues) ERKGSLTLRSHHKKYSRPVLVYSWHHNREAFPKDYDIEGPEKVKKLCNSTYWRLGTDEPP IWISETHEQMSRVFLKREFAEIKSKALLNEDTLCSGIIERDTGLPATGFGAVFTRHPPDR DKMYDLTTYSEDYVPPYDYQPQDYACLDDYSIVHRKCRSQFTDLDGSKRFGINTWHDESG IYANSDAKQKLY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | ERKGSLTLRSHHKKYSRPVLVYSWHHNREAFPKDYDIEGPEKVKKLCNSTYWRLGTDEPPIWISETHEQMSRVFLKREFAEIKSKALLNEDTLCSGIIERDTGLPATGFGAVFTRHPPDRDKMYDLTTYSEDYVPPYDYQPQDYACLDDYSIVHRKCRSQFTDLDGSKRFGINTWHDESGIYANSDAKQKLY | |||||||||||||||||||
1 | 5fi9A2 | 0.05 | 0.04 | 0.85 | 0.65 | DisCoVER | PPAPVSRVLF--------LTDL-----HWDHEYLPLCCRWG-EYSKCDLPLRTLLLK-AGPFEMVYWTGDIPAHDVWALTTITLVPAVGNHIS--LNMNFCSRDKVHIIG-HIPPCLKSWQFFGHTHVDEFFLAPSA-T-T-----F--INLNPGYRVYQIDGNYSSHVVLDHETYIYRARDAMPASWHNK- | |||||||||||||
2 | 1xagA | 0.02 | 0.02 | 0.77 | 0.67 | DEthreader | ---------------QYF---IPAGEKTKTFDFGFVAATLLGVHFSGGKVG-IN----SKQGKN--LI--GA--FY-RPTAVIYLLQSGAEVYKHAATQEQHFK------D-REILQS-LNGMD-YIAKGIEKLIVVADEKEQ-G--VRKF-LNLGHTGHAVEYYHK-I-PHGHAVGIIYQFLYLQHACEQL | |||||||||||||
3 | 1vt4I | 0.05 | 0.05 | 1.00 | 0.67 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 6em3n | 0.06 | 0.05 | 0.89 | 0.58 | EigenThreader | AVRKLQ---------VSLADFRRLCIFKGIYPRF------------YYAKDIQYLMHEPVLAKFREHKTFARKLTRALGRGEVSSRDIDDALNMLFLFSNVSSKIINDAQKICNQWLAYVAKERLLHFVLYKLYTDSGLIYPPESRYDSPVASLFSAFVFYVSRGGNVISKVTHQIVGRTYIQPQWIFDCIN | |||||||||||||
5 | 2pffA1 | 0.15 | 0.12 | 0.82 | 0.31 | HHpred | GAKGSTLIVVPFNQGSK-QDVEALIEFIYDTEKNGDLDAIPPEQGIE------LEHIDSKEFIMLTNILRMMGCVKKQKSAR-------------GIETRP-------AQVILPM-SPNHGTFGGDGMYSESHSESWANQL----TVCGAIIGWTR-GTGLMSANNIEKMGVRTFSQKEMAFNLLGLVVEL- | |||||||||||||
6 | 2pffB | 0.03 | 0.01 | 0.15 | 0.77 | MRFsearch | ---GVRVIVAGT-------------------------------------------------GMDLYKTSKAAQDVWNRADN--------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 1i97H | 0.10 | 0.06 | 0.66 | 0.38 | FFAS-3D | ------------------------------------------------------------MLTDPIADMLTRI--RNATRVYKESTEVPASRFKEEILK--ILAREGFIKGYERVEVDGKPYLRIHLKYGPRRQGPDPRPEQVIKHIRRISRPGRRVYVGVKEIPRRRGLGIAILSTPKGVLTDREARKL-- | |||||||||||||
8 | 5voxO | 0.11 | 0.10 | 0.95 | 1.05 | SPARKS-K | ETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDK------SIKDLITLISNESSQLDADVRTYANYNSAKTNLAAAERKKTGDLSVRSL---HDIVKPEDFVLNSEHLTTVLVAVPKSL-KSDFEKSYETLSKNVVPASASVIAEDAEYVLLFKKNVQEFTTAAREKKFIPREFNYSEELIDQLKKEHDSA | |||||||||||||
9 | 4ndcA | 0.10 | 0.03 | 0.26 | 0.42 | CNFpred | -------------------------------------------------------------SLPEWLTKYMNFMFDVNDT---GDNIIDKHEYSTVY--MSYGIPKSDCDAAFDTL---------------------------------------------------------------------------- | |||||||||||||
10 | 6ggyA | 0.07 | 0.05 | 0.77 | 0.67 | DEthreader | KAGLKLTNT------PLKL-T--PT--A--AIPLYLRRHVTSHPYEAVGAL-VAMVISGD--SF-HDYGRGG-RGWRDLHGWPLILILLSELLELQKRT----------G-KDSLD--IAEEMALLLDTLGKPISYDSIQKRYNNDEQQNLGRAFFFGGAMNSRIYGVPEY-I-NERG-R--M--------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |