>PF15130 (226 residues) ADPMTRKSTTVCRLRQHLRRKRESLADHFDFKMYLSFVFKDKKKSCALFEVPDVIPVMTN NYKDSIMKGVKEEAYSLESSQELLEKDVVQLHAPHYRPMRKDIIGCNQPVDFFLWPRKDI DKIVCHLFSRWKEDTDADYRPVQVEFEFDHMDYEKQLLHLLARRDSTGLIINNPSQSMFL FVDRHNLKTPQNKAVFFKLSSLCLHVQQDQLMHWGPGSIDHVLDQY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | ADPMTRKSTTVCRLRQHLRRKRESLADHFDFKMYLSFVFKDKKKSCALFEVPDVIPVMTNNYKDSIMKGVKEEAYSLESSQELLEKDVVQLHAPHYRPMRKDIIGCNQPVDFFLWPRKDIDKIVCHLFSRWKEDTDADYRPVQVEFEFDHMDYEKQLLHLLARRDSTGLIINNPSQSMFLFVDRHNLKTPQNKAVFFKLSSLCLHVQQDQLMHWGPGSIDHVLDQY | |||||||||||||||||||
1 | 5cerA1 | 0.08 | 0.04 | 0.42 | 0.62 | DisCoVER | ----------------------------RHKTVLHLTPTANG--SMDLHVEGSRDPIFGRNL-------------------------SYFL---------------------------------ISELN-------------RMKVTKIE--NL--T--FD----ENFLLDWLA-ERIQAVILKFSTA-PTIEVRNISFLPKSVVLQS------------------ | |||||||||||||
2 | 5mrwA | 0.08 | 0.05 | 0.68 | 0.67 | DEthreader | AQGFLLIATFLLVLMVLARPLGSGLARLIN---------------------VTNSAAITLWVLPVALLIALFFIALQGPVA-SQE-AIKMLGT--NG-GGFFNANSHNFQMLAI------------PTLCAFMGRRQGRLLMSFVVTVAMHD------------------------VGSG--T-LVGAAFSLYVSSAANNMGR-VIIVMIA-THFVGLIG------ | |||||||||||||
3 | 1iahB | 0.08 | 0.08 | 1.00 | 0.51 | CEthreader | YYYSAVERNNLMRLSQSIPFVPVPPRGEPVTVYRLEESSPSILNNSMSSWSQLGLCAKIEFLSKEEMGGGLRRAVKVLCTWSEHDILKSGHLYSSIYKEDTVLHLCLREIQQQRAAQKLTFAFRFLEVFLLYCHSAGQWFAVEECMTGEFRKYNNNNGDEIIPTNTLEEIMLEYTRGELLVLDLQGVGENLTDPSVIKAEEKRSCDMVFGPANLGEDAIKNFRAKH | |||||||||||||
4 | 4p9hH | 0.05 | 0.04 | 0.67 | 0.55 | EigenThreader | V------------------------NTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASH-----------------------HF--RGRVLISAVD-----LTGSSPPISSLEIKNLTSDDTAVYFCTTTYDKWSGLFSSWGQGTLISVSA----------ASTKGPSVPLAPTAALGCLVKDYFPEPVSGLYSLSSVVPYICNVNH------KPSNTK-----VD | |||||||||||||
5 | 6ibdA1 | 0.22 | 0.12 | 0.57 | 0.29 | HHpred | GSEKLRRNQNYMNILRFLALGDKKLTHRFT----HLFWFGDLNY-----RVD-----LPTWEAETIIQKIKQQQY-----ADLLSHDQLLTFAPTYRF----ERLTKYNCDRVLWKSYPLVHVVCQSYGSTSDIMTSDHSPVFATFEAGVT--------------------------------------------------------------------------- | |||||||||||||
6 | 4o4bB | 0.16 | 0.06 | 0.38 | 0.45 | MRFsearch | -DGKKYRKELVPYFISQLDKMIEVMKK-REYKMFSLFVYDSTKYNCKMIDFAHNWILSEETVEDGFLFGLNNLKSILEDIENEFKSL------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 4ev1A | 0.09 | 0.07 | 0.80 | 0.42 | FFAS-3D | ---------------------EQQIKEKLD--SVPIYLVTNEKGLPLSRPLPNITGAYMSRQEQAFINELRNAKNKDPKMQEIVKSQVTAVPLGVIYQQLQQTKKDPNRLLFAFKPDQEIKGAMDLLRQSGQQVNQFKSVPMVVPLFLSKQDAQGLLGQVKPKHPKADIQVLDIDGVL------QTLQDKNDTWL-----NQVVLVPSPESREY------------ | |||||||||||||
8 | 6rreB | 0.16 | 0.14 | 0.88 | 0.49 | SPARKS-K | LTRYPDSKKVTESLIHTIYSLRSKHAPLAEFTMSLCVTYQKDEQFCAGFGIGDTGIAIKRNFKDAFDNYSSAN-----------IDLVIERNSVFNTKVMPG--------DELVGYTYVPPMLE-MTEKEFEVETVRIVRHLNLDPNFDDKDLFSQLLQVVKSKQKTGQ--IQRFGDDFTVGRLVIP----DQLLINQLRIHALSIVSDGLLSYIKNNIE-KATLY | |||||||||||||
9 | 4l1gA | 0.09 | 0.07 | 0.76 | 0.63 | CNFpred | ---------FTPKILDKLKQHN------VKATFFLLGENAEK-FPNIVKRIGHVIGNHTYSHPNLAKVNEDEYRNQIIKTEEILNRLAGY------------------APKFIRPMYGEILENQLKWATEQ------NFMIVQWSVDTVDWVSADTITNNVLGNS--------FPGSVILQHSTPGG---HLQGSVDALDKIIPQLKTKG---ARFVTLPSMFQTS | |||||||||||||
10 | 4udpA | 0.06 | 0.04 | 0.76 | 0.67 | DEthreader | -----------PENNIPEIH-PSDKFFWPNLTIHRAAEH----PGITREPQFYEQGGSVNMVVSNRFIERDAGGNAGPIPSAAGYT-GAEHSS-------------------VFWV----PSSTGWLKLK----DPFSYPDVDFNLDPRLGRLKAGLRLITHYFLALALSRF----AAPQPGPLLNDLLQDEALYLNVGGVWHA-S----TARI-QAVVDRVYGLR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |