Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | SRMVDSLVSFLSEFVDDWLANDMRVAVFKILFTWLIISLVAIHFAWKVYGNTVNDMYYRQGTGGQNGGTPDTAPHLSGWESAAGDAMKTHRE |
1 | 2lh7A2 | 0.07 | 0.02 | 0.32 | 0.75 | DisCoVER | | -----------------------------------------------------ATLKNLGSVHVSKGVADAHFVIKKEMDDA---------- |
2 | 1no7A1 | 0.11 | 0.10 | 0.91 | 1.00 | DEthreader | | -IHGSEHFC-LARVVQCITSNNTRPEECMAVYRDLVAHVEALAQLVDDFAEHMRDLLPARAALDRRDCRVSAG--T--AGVR-FDVYATLQ- |
3 | 6i0dL | 0.12 | 0.12 | 1.00 | 0.44 | CEthreader | | KIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHAHALIGALALGGLPLLSGFWSKDAILAATLTYPFGGVGFYVGA |
4 | 3hnwA | 0.02 | 0.02 | 1.00 | 0.50 | EigenThreader | | EEYLQRVASYINNKITEFNKEESYRRLRTDNIADDYFKASLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLET |
5 | 5b2gA | 0.16 | 0.13 | 0.84 | 0.30 | HHpred | | -QAARALISIIVAALGVLLSAKAKTMIVAGVVFLLAGLMVIVPVSWTAH--NIIQDFYNPLVAGQKRE--MGASLYVGWAAS---------- |
6 | 6e3yR2 | 0.09 | 0.05 | 0.63 | 0.32 | MRFsearch | | --AVRATLILVPLLGIEFVLIPWREVYDYIMHILMHFQGLLVSTIFCFFNGEVQAILRRN-------------------------------- |
7 | 4uc1A | 0.18 | 0.13 | 0.73 | 0.51 | FFAS-3D | | SGQALAFYAAQLAFNTLWTMKRMATALAVVMVMWLFVAATMWYLIWATATTGLNFEAMR-----LNWNRPEA-------------------- |
8 | 6w2rA1 | 0.08 | 0.08 | 1.00 | 0.72 | SPARKS-K | | EDERRELEKVARKAIEAARETDEVREQLQRALEIARESKTAVKLALDVALRVAQEAAKRGNKDAIDEAAEVVVRIAEESNNSDALEQALRVL |
9 | 4eg1A | 0.09 | 0.05 | 0.62 | 0.51 | CNFpred | | QKAIIAVFDVLRAINAYVTD-ERLRTVLYITLEGVRVTTLLLSPILPRKSVVIFDMLG---------------------------------- |
10 | 3a79A | 0.07 | 0.07 | 0.91 | 1.00 | DEthreader | | DSGVCKSLLVLIL-SI-TIEG---LSLLYQTGFSALSLLSESTN-LARFTDESFNELFPVLLEKVLKSLPSLLNLTMRFLNV-LDVSNNNR- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|