Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | EAAEALRNIEQKYKLFLQQQFTFIGALQHTREAARDTIRPVASISQVQNYMDHHCHNSTDRRILTLFLSICNDLSNLCTMLETRYPDNTTTKDILEKCKLLLSHNNDLSTIRAKYPHDVVNHLSCHEARNHFGGVVSLIPIVLDYLKEWVAHVEKLPR |
1 | 4grvA1 | 0.11 | 0.08 | 0.75 | 1.00 | DEthreader | | TVHYHLGSLALSDLLILLLMPVELYNFWVH--H----------------------GDAGCRGYYFLRDACTYATALNVASLSVRYNAARAVVIAFVVCWLPYHVRRLMFC----------------FYHYFYMLTNALAYASSAINPILYNLVSANFR |
2 | 1rw5A | 0.06 | 0.05 | 0.89 | 1.00 | DEthreader | | TLRDLFDRAVVLSHYIHNLSSEMFSEFDKRYTRGFIKINSCHTSEPLYHLVTEVRGPEAILSKAVEIEEQTKRLLEGMELIVSQVHP-E--TK-EN--EIY----P---VWSGLLQMDEESRL--SAYYNLLHCLRRDSHKIDNYLKLLKCRIIHN-- |
3 | 5msjA | 0.07 | 0.05 | 0.75 | 1.00 | DEthreader | | STENLLSYFPKKISELDAFLKEALN-EANL-SNL-KA------------C--NE--K--VV-LLQRLKPEIKDVTEQLNLVTTWLQEFELMTNLHTKLEGFHTQSKYFSR------------------EAEYQEIRLMVMEIRNAYAVLYDIILKFLK |
4 | 4mhlA | 0.11 | 0.09 | 0.81 | 1.00 | DEthreader | | DPRAELDSTVLLTRSLLADTRQLAAQLRDKFP-ADGDHNLLPDSYRHQWLRRAGLKEPELGTLQARLDRLLRRLQLLMSRLA------------LP--Q-----DPP--APPLAPPSSWGGIR---AAHAILGGLHLTLDWAVRGLLLLKTRL----- |
5 | 2hsbA | 0.06 | 0.04 | 0.64 | 0.61 | DisCoVER | | -----------LELRIRKAE-KLVQDAKKEFEGLYERCCSTAYY------------------AF-HAAKAL-LG-GTIYLIWECREE---L--GLSDDCSKLSRAFLREESDKEVSKDLA----------IILDAEIFVQKAKNAV--NKN------- |
6 | 5mskA | 0.11 | 0.08 | 0.74 | 1.00 | DEthreader | | QADDFLTFLPRKIISLSQLLQESLN-VAD-LSSL-RA---------------NE--K--LA-LLALVKPEVWTLKEKCILVITWIQELERVNAVKTKVEAFQTISKYFER------------------EAAYGALRAMVLDLRAFYAELYHIISSLIV |
7 | 4iggA1 | 0.06 | 0.05 | 0.80 | 0.64 | CEthreader | | ADMADVYKLLVQLKVVEDGILKLRNA----------------------------GNEQDLGIQYKALKPEVDKLNIMAAKRQQELK-DVGHRDQMAAARGILQKN---VPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDDA |
8 | 6egcA | 0.12 | 0.11 | 0.89 | 1.00 | EigenThreader | | EIIRELERSLREQEELAKRLKELLRELERLQREGSS-------------DEDVRE---LLREIKELVEEIEKLAREQKYLVEELKRQGNEIIRELERSLREQEELAKRLKELLRELERLQREGSSRELLREIKELVEEIEKLAREQKYLVEELKRQ-- |
9 | 2mbzA | 0.13 | 0.11 | 0.82 | 0.25 | HHpred | | ------LTPEEKFEVFGDFD------PDQYEEEVRERWGNT---DAYRQSKEKTASYTEDQRIQDEADELTRRFVALMD--AGEPADSEGAMDAAEDHRQGIANHYD-------CGYEMHTCLSDERFTRNIDAA-K--PGLAAYMRDAILANAVR-- |
10 | 5j1iA | 0.09 | 0.08 | 0.89 | 0.38 | MRFsearch | | --RSELELTLGKLEQVRSLSAIYLEKLKTIEEQLKEAQAVPATLPELEATKASLKKAEAQQPTFDALRDELRGAQEVGERLQQRHGWRERVAQLLERWQAVLAQTDV-------------RQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQ--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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