>PF15112 (308 residues) RFNNPGYKNWLRVGIALLTTRDGLTNVTEQAAKELQAELKTKLGDSVQNCTCNPKSRGCK DCDPWRDELKKYYTGDANRIGWTNCTPNKWRKEPWEVAKVFMLKGQPADNTGPEKSDPSA LLNFLVFCNYCRKYISKVEPLKNVIEVRNKTMHSLDLRLDRQTFNEYMDKMERLLRLVGD PTAQKAAKEIFKIKKEEFHIGAGKACMDAEVRVLTDVMNEHQKLLQLHREELEDHGTRLD TLEHCTVPKEEMLKTVEVLLKVVKNNTDLHRALKDQALELSATVQQLQDRLGKAERDITE VRGAMGQL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | RFNNPGYKNWLRVGIALLTTRDGLTNVTEQAAKELQAELKTKLGDSVQNCTCNPKSRGCKDCDPWRDELKKYYTGDANRIGWTNCTPNKWRKEPWEVAKVFMLKGQPADNTGPEKSDPSALLNFLVFCNYCRKYISKVEPLKNVIEVRNKTMHSLDLRLDRQTFNEYMDKMERLLRLVGDPTAQKAAKEIFKIKKEEFHIGAGKACMDAEVRVLTDVMNEHQKLLQLHREELEDHGTRLDTLEHCTVPKEEMLKTVEVLLKVVKNNTDLHRALKDQALELSATVQQLQDRLGKAERDITEVRGAMGQL | |||||||||||||||||||
1 | 4rsiB | 0.08 | 0.03 | 0.43 | 0.70 | DisCoVER | VLLINGFHGRLGLGDVAIST---A--CP------R---LD-DV--VVDTVCAHCILGYARFI--LLDRLRQFLPITPENVPRLFDLVKPKNPKFSNAFYSVLRDTLVAQNLKQANVAFRVVT--VD-----------------G--KLI--DIGTMS--------GGGNHV--AK-------G----------------------------------------------------------------------------------------------------L--M----------K--LKVDDY-- | |||||||||||||
2 | 5mrwA | 0.05 | 0.04 | 0.73 | 0.83 | DEthreader | TELF------NG--SFVTNTNW---RS-YSGETLSYSQMAGLTVQFLSASGIAF-GNAWV-DL--RI-TLWVL-----VPVALLIALFFIQPVQEAIKMLGT----NPTALTNFVQM-LAIFLIPTALCFGMLLWAMSVIFVCVLFVVTTGAVIAMHSFTALGGMVPMWLMQIGEVGYGTLAILVTPTLVLMGA--------------------------MMTDAGRSA--------------------------PHGFSEVLY----AGLSASPFWNCLAFCMFVGRFGVIPVMIA-VLLIGTVLLA | |||||||||||||
3 | 6h2xA | 0.09 | 0.09 | 0.96 | 0.57 | CEthreader | QIRLEEQNEVVAEAIERQQENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQHLPDLTADCAAEWLETFQAKELEATEKLSLEQKSAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVD-QRHLAEQVQPLRRLSELESGGSD------------RVDEIRERLDEAQEAARFVQQFGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQQRDARQQAFALTEVVQRRAHFSYSDSAELSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDTKKELLNDL | |||||||||||||
4 | 3ulqA | 0.06 | 0.06 | 0.89 | 0.75 | EigenThreader | MEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRLTGLLEYYFNFFRGMYELDQR----EYLSAIKFFKKAES------------KLIF---VKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQCHSLFATNFLDL-----KQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKL--------GKIDKAHEYHSKGMAYSQKAGIYLSEFEFLKSLYLAIDVAKYYHERKNFQKASAYFLKVEQV | |||||||||||||
5 | 1vt4I | 0.14 | 0.10 | 0.70 | 0.37 | HHpred | --GLATWDNWKHVNCKLTTIIESSLNVLEP------AEYRKMFDRLSV-FPPSAHIPTILLSLIWFVVVNKLHKYSLVQPKSTISIPSIYAVDHYNIPKTFDSDDL--IPPYLDQYFYSHIGHHLKNIELFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK-----PYCDNDPKYERLVNAILDFLPKIEEN---LIC-SKYT-------------------DLLRIAL----MAEDEAIFEEAHKQVQR-------------------------------------------------- | |||||||||||||
6 | 2tmaA | 0.14 | 0.10 | 0.72 | 0.48 | MRFsearch | ----AIKKKMQMLKLDKENALDRAEQAAEDRSKQLEDELVSLQKK----------------LKGTEDELDKYSE------------------------------------------ALKDAQEKLELAE-----KKATDAEADVASLNRR------IQLVEEELDRAQERLATALQKLEEEKMEIQEIQLKEAKHI--------------AEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDL | |||||||||||||
7 | 4ckgA1 | 0.12 | 0.09 | 0.75 | 0.82 | FFAS-3D | -KDSPRFRASIEVEAEVSELETRLEKLL-KLGTGLLESGRHYLAAS----------------RAFVVGICDLARLGPPE------------------------------------PMMAECLEKFT------------VSLNHKLDSHAELL--------DATQHTLQQQIQTLVKE-GLRGFREARRDFWRGAESEAALTHNAEVPRRRAQEAEEAGAALRTARAGYRGRALDYALQINVIEDKRKIMEFVLRLVEAQATHFQQGHEELSRLSQYRKELGAQLHQLVLNSAREKRDMEQRHVLLKQ- | |||||||||||||
8 | 3zh9B | 0.09 | 0.08 | 0.92 | 0.64 | SPARKS-K | GEVHPVYCLYGKETYLLQETVSRIRQTVQETKDFNLDPLDQAIADAETFPFTGEKKKEKIEHNV--SALESYIQSPAPYTPYEKLDERK------KLTKALKKHAFMMEAKELNAKETTDFTVNLAKT---EQKTIGTEAAEHLVLLVNG------------HLSSIFQEIQKLCTFIGLDDVKMLVARSLEQNIFELINKIVNRKRTESLQIFYDLLKQPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLVKLAMDQARLFS--EEELRLIIEQLAVMDYEMKTGKKDKQLLLELFLLQLLKR | |||||||||||||
9 | 5j1iA | 0.08 | 0.06 | 0.73 | 0.82 | CNFpred | -----TLGKLEQVRSLSAIYLEKLKTISIRGTQGAEEVLRAHEEQLKEAQAVPATLPELEATKASLKKLRAQAEA------------------QQPTFDALR-------------DELRGAQEVGERLQ--QRHGERDVEVERWRERV-------------AQLLERWQAVLAQTDVR-QRELEQLGRQLRYYRE----------------------------SADPLGAWLQDARRRQEQIQAM-QAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQL-KVQSGSESVIQEYVDL | |||||||||||||
10 | 4uhwA | 0.05 | 0.04 | 0.74 | 0.67 | DEthreader | ------------------------------GGGC-PANACLIPICSLYGAAFLMIMAKQSRSPVSPDRIEELSVVNHTLGAG-------------LSLAQ-VKDILADVVQ--QMYHALLHLASLGGHIISRHPD--LNPILAVGNCNIP-YSRKWEFFFIIRE-LC-I-S-YGGVGPPGKFKRTLIISFLFKFYLEVSQLKDVHYPSLA-DKYESALEDLHKVEHKNIRTD-IVM----SINPAIDIGQIEGAFIQGMGLYTIE----PAICD-MP----------------TLYSSKGLGESGVFL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |