Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | QAQRLLAQRRPRRPFFESFIRTLIIVCAALAVVLSSVSICDGHWLLAEDRLFGLWHFCTTSNQTRPHCLRDLSQAHVPGLALGMVLARSVSALAVVAAIFGLELLMVSQVCEDLYSRRKWALGSFLLLISFILSFGGLLSFVILLRNQVTLIGFTLMFWCEFTASFLFFLNAISGLHINSITH |
1 | 5vjsA | 0.11 | 0.09 | 0.84 | 1.00 | DEthreader | | -----SP-LRQEHQQLAQEFQQLLQEIQQLGRELLKGEL-QGIKQL----------------------R-EASEKALQKILEDEEKHIELLETLQQTGQEAQQLLQELQGLLRQKHQQLAQKIQQLLQKHQQLGAKILEDEEKHIELLERLLKEGIKQYRELQQLGQKAQQLVQKLQQTGQKL |
2 | 6qkcI | 0.16 | 0.14 | 0.87 | 1.06 | MUSTER | | ------------------VQVLLTTIGAFAAFGLMTIAISTDYWLYTRLTHSGLWRICCLEGLKRGVCVKINHFA--EYLLRVVRASSIFPILSAILLLLGGVCVAASRVY--KSKRNIILGAGILFVAAGLSNIIGVIVYISANAGKNHY--YGWSFYFGGLSFILAEVIGVLAVNIYIERS |
3 | 6qkcI | 0.15 | 0.13 | 0.87 | 1.51 | HHsearch | | ------------------VQVLLTTIGAFAAFGLMTIAISTDYWLYTRLTHSGLWRICCLEGLKRGVCVKINHF--AEYLLRVVRASSIFPILSAILLLLGGVCVAASR---VYKSKRNILGAGILFVAAGLSNIIGVIVYISANAG-KNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERS |
4 | 5vhxE | 0.14 | 0.11 | 0.83 | 1.05 | FFAS-3D | | ----------------RRGRALLAVALNLLALLFATTAFLTTYWCQGTQRHTGIWYSCEEGEKC-----RSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHS-SDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLYGWS--FCLAWGSFTCCMAASVTTL------- |
5 | 2lemA | 0.06 | 0.05 | 0.86 | 1.00 | DEthreader | | -------QSQWDKKDFANVYVDAVKDSGRDYVSQFESSS--------------LGQQLNLLLE-NWDTLGSTVSQLQERL-GPLTRDFWDNLEKETDWVRQEMNKDLEVKQKVQPYLDEFQKKWKEDVELYRQKA-SP-QGAELQESARQKLQMHVDSLRTQLAHSEQMRESLAQRLAELKSP |
6 | 4z34A | 0.12 | 0.09 | 0.75 | 1.00 | DEthreader | | AFYNRKHLATWNSKLVMGLGITVCIFIMLANLLVMVAIYVNRRF---------------------------H--------F-PIYYLMANLAAADFFAGLAYFYLMFNTGNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITQMMSLLTVVIVLGAFIICWT-GL--YEKF------ |
7 | 6ov2A | 0.19 | 0.16 | 0.85 | 0.84 | HHpred | | ------------------GLELLGMTLAVLGWLGTLVSCALPLWKVTAVVWEGLWMSCVVQSTGQMQCKVYDS---LLALPQDLQAARALCVIALLLALLGLLVAITGAQCEDEGAKRIVLTAGVILLLAGILVLIPVCWTAHAIIQDFYKRELGASLYLGWAAAALLMLGGGLLCC------ |
8 | 6qkcI | 0.12 | 0.10 | 0.83 | 0.96 | DisCoVER | | ------------------QVLLTTIGAFAAFGLMTIAISTDYWLYTRGLTHSGLWRICCLEGLKRGVCV-KI---NHFAEYLLRVVRSIFPILSALLLL-GGVCVAASRV-YKSKR--NI--ILGAGILFVAAGSNIIGVYISANAGKNHYS-YGWSFYFGGLSFILAIGVLAVNIYIERS-- |
9 | 6akfA | 0.15 | 0.13 | 0.85 | 0.37 | MRFsearch | | ----------------SMGLEITGTSLAVLGWLCTIVCCALPMWRVSQITWEGLWMNCVVQSTGQMQCKMYDSLL---ALPQDLQAARALIVVSILLAAFGLLVALVGAQATNTAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRDFQKREMGAGLYVGWAAAALQLLGGALL-------- |
10 | 5vhxE | 0.12 | 0.11 | 0.89 | 0.94 | SPARKS-K | | -------------KTSRRGRALLAVALNLLALLFATTAFLTTYWCQGTRFHTGIWYSCEEGEKCRSF------IDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHSSDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTK-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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