>PF15108 (183 residues) QAQRLLAQRRPRRPFFESFIRTLIIVCAALAVVLSSVSICDGHWLLAEDRLFGLWHFCTT SNQTRPHCLRDLSQAHVPGLALGMVLARSVSALAVVAAIFGLELLMVSQVCEDLYSRRKW ALGSFLLLISFILSFGGLLSFVILLRNQVTLIGFTLMFWCEFTASFLFFLNAISGLHINS ITH |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | QAQRLLAQRRPRRPFFESFIRTLIIVCAALAVVLSSVSICDGHWLLAEDRLFGLWHFCTTSNQTRPHCLRDLSQAHVPGLALGMVLARSVSALAVVAAIFGLELLMVSQVCEDLYSRRKWALGSFLLLISFILSFGGLLSFVILLRNQVTLIGFTLMFWCEFTASFLFFLNAISGLHINSITH | |||||||||||||||||||
1 | 5vjsA | 0.11 | 0.09 | 0.84 | 1.00 | DEthreader | -----SP-LRQEHQQLAQEFQQLLQEIQQLGRELLKGEL-QGIKQL----------------------R-EASEKALQKILEDEEKHIELLETLQQTGQEAQQLLQELQGLLRQKHQQLAQKIQQLLQKHQQLGAKILEDEEKHIELLERLLKEGIKQYRELQQLGQKAQQLVQKLQQTGQKL | |||||||||||||
2 | 6qkcI | 0.16 | 0.14 | 0.87 | 1.06 | MUSTER | ------------------VQVLLTTIGAFAAFGLMTIAISTDYWLYTRLTHSGLWRICCLEGLKRGVCVKINHFA--EYLLRVVRASSIFPILSAILLLLGGVCVAASRVY--KSKRNIILGAGILFVAAGLSNIIGVIVYISANAGKNHY--YGWSFYFGGLSFILAEVIGVLAVNIYIERS | |||||||||||||
3 | 6qkcI | 0.15 | 0.13 | 0.87 | 1.51 | HHsearch | ------------------VQVLLTTIGAFAAFGLMTIAISTDYWLYTRLTHSGLWRICCLEGLKRGVCVKINHF--AEYLLRVVRASSIFPILSAILLLLGGVCVAASR---VYKSKRNILGAGILFVAAGLSNIIGVIVYISANAG-KNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERS | |||||||||||||
4 | 5vhxE | 0.14 | 0.11 | 0.83 | 1.05 | FFAS-3D | ----------------RRGRALLAVALNLLALLFATTAFLTTYWCQGTQRHTGIWYSCEEGEKC-----RSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHS-SDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLYGWS--FCLAWGSFTCCMAASVTTL------- | |||||||||||||
5 | 2lemA | 0.06 | 0.05 | 0.86 | 1.00 | DEthreader | -------QSQWDKKDFANVYVDAVKDSGRDYVSQFESSS--------------LGQQLNLLLE-NWDTLGSTVSQLQERL-GPLTRDFWDNLEKETDWVRQEMNKDLEVKQKVQPYLDEFQKKWKEDVELYRQKA-SP-QGAELQESARQKLQMHVDSLRTQLAHSEQMRESLAQRLAELKSP | |||||||||||||
6 | 4z34A | 0.12 | 0.09 | 0.75 | 1.00 | DEthreader | AFYNRKHLATWNSKLVMGLGITVCIFIMLANLLVMVAIYVNRRF---------------------------H--------F-PIYYLMANLAAADFFAGLAYFYLMFNTGNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITQMMSLLTVVIVLGAFIICWT-GL--YEKF------ | |||||||||||||
7 | 6ov2A | 0.19 | 0.16 | 0.85 | 0.84 | HHpred | ------------------GLELLGMTLAVLGWLGTLVSCALPLWKVTAVVWEGLWMSCVVQSTGQMQCKVYDS---LLALPQDLQAARALCVIALLLALLGLLVAITGAQCEDEGAKRIVLTAGVILLLAGILVLIPVCWTAHAIIQDFYKRELGASLYLGWAAAALLMLGGGLLCC------ | |||||||||||||
8 | 6qkcI | 0.12 | 0.10 | 0.83 | 0.96 | DisCoVER | ------------------QVLLTTIGAFAAFGLMTIAISTDYWLYTRGLTHSGLWRICCLEGLKRGVCV-KI---NHFAEYLLRVVRSIFPILSALLLL-GGVCVAASRV-YKSKR--NI--ILGAGILFVAAGSNIIGVYISANAGKNHYS-YGWSFYFGGLSFILAIGVLAVNIYIERS-- | |||||||||||||
9 | 6akfA | 0.15 | 0.13 | 0.85 | 0.37 | MRFsearch | ----------------SMGLEITGTSLAVLGWLCTIVCCALPMWRVSQITWEGLWMNCVVQSTGQMQCKMYDSLL---ALPQDLQAARALIVVSILLAAFGLLVALVGAQATNTAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRDFQKREMGAGLYVGWAAAALQLLGGALL-------- | |||||||||||||
10 | 5vhxE | 0.12 | 0.11 | 0.89 | 0.94 | SPARKS-K | -------------KTSRRGRALLAVALNLLALLFATTAFLTTYWCQGTRFHTGIWYSCEEGEKCRSF------IDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHSSDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTK-- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |