>PF15100 (244 residues) ALCHVAVASCLCLATVYTGVFDGVFVQVGYEHYAETPVASLPAFLAMPFNSLINVAYVLL GVYWLQRNASTPERSAEMQRARYLKDVFAAMALVYGPVQWLRIGTQTRPAAVLDQWFTLP IFAWPVAWCLYLDRGWKPRLLLAIECLSLCSYGLALLHPCGFEVALGAHIAAAVGQALRA HGRYGSVCSGVYLALAVLSCLGFVVLKLCDHQLSRWHLFQRLTGHFWSKVCDVLQFHFAF LFLT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | ALCHVAVASCLCLATVYTGVFDGVFVQVGYEHYAETPVASLPAFLAMPFNSLINVAYVLLGVYWLQRNASTPERSAEMQRARYLKDVFAAMALVYGPVQWLRIGTQTRPAAVLDQWFTLPIFAWPVAWCLYLDRGWKPRLLLAIECLSLCSYGLALLHPCGFEVALGAHIAAAVGQALRAHGRYGSVCSGVYLALAVLSCLGFVVLKLCDHQLSRWHLFQRLTGHFWSKVCDVLQFHFAFLFLT | |||||||||||||||||||
1 | 3rkoB | 0.13 | 0.11 | 0.88 | 1.14 | CNFpred | LLMYLGWEGVGLCSYLLIGFYYTDPK-------------NGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFLMWATLMLLGGAVGKSAQLP---LQTWLADAMAGPTPVSALIHAA---------TMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQ--TDIKRVLAYSTMSQIGYMFLALGV--QAWDAAIFHLMTHAFFKALLFLASGSVILACH | |||||||||||||
2 | 6krzA | 0.09 | 0.08 | 0.89 | 1.17 | DEthreader | -------------------------PDWLKDNDYLHGHR--IFRIHETGNIWTHLLGFVLFLFLGILTLRPNMYFMAPLQEKVVFGMFFLGAVLCLSFSWLFHTVYESRFSKLAYSGIALLIMGSFVPWLYSFSPPRLIYLSIVCVLGISAIVARFAKHQTRAGVFLGLGLSGVVPTMHFTIAEGATGQMGWFFLMAVMYITGAGLYAARIPERFFGKFDIWQSHQIFHVLVVAAAFVHFYGVS | |||||||||||||
3 | 5voxR | 0.09 | 0.04 | 0.48 | 0.62 | DisCoVER | --YM-WANLGIALCVGLSVVG--------------------------------AAWGIFITGSSMIGA-----GVRAPRITTK-NLISIIFCEVVAIY--------------GL--IIAIVFSSKVATAENMYS----KSNLYTGYSLFW-------------------AG--IT--V---------------GASNLICGI----------------------------AVGITGATAAISE- | |||||||||||||
4 | 3ayfA | 0.08 | 0.07 | 0.83 | 0.83 | DEthreader | ITILISS------------GFVSFLFVSMGQWLGVNG---EWFLLQLGRIWQIILVVGMLLWLFIVFRGVKRGKRESDKGIHLLFYSAIAVPFFYIFAFFIQPTFAD--RW--IH-VEGIFEVAVIGFLLVQLTKKSVRALYFQFTILLGSGVIGIGLGAVFSALEVIPLTLLILEAYEQYKMMRGKATFWFLISTAIWNVGAGFGFLINSYEHG----------------Y---A--VLYS-E | |||||||||||||
5 | 3ayfA | 0.06 | 0.06 | 1.00 | 0.49 | CEthreader | LFWALVVLVGGSMIGQWLGVNGYLGNEWFLLGHQGWEYIELGRIWQIILVVGMLLWLFIVFRGVKRGLKRESDKGGLIHLLFYSAIAVPFFYIFAFFIFTMADFWRWWIIHLWVEGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVIGIGFSALEVIPLTLLILEAYEQYKMMRDGGANFPYKATFWFLISTAIWNLVGAGVFGFLILTPAHGHAAMMGVYGMFAIAVLLYSL | |||||||||||||
6 | 4or2A | 0.09 | 0.08 | 0.91 | 0.93 | EigenThreader | KVKEAQAAAEQLKTTRNAYIQKYLI---PVRYLEWSN-------IESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIATSCYLQRLLVGLSSAMCYSALVTKTNRIARILQVIIASILISVQLTLVVTLIIMEPPMVVAPLGYNGLLIMSCTYYAFKTEAKYIAFTMYTTCIIWLAFVPIYFGSN-----------YKIITTCFAVSLSVTVALGCMF | |||||||||||||
7 | 2yzsB2 | 0.17 | 0.09 | 0.54 | 0.39 | HHpred | ----------EFRKLCYKKLEE-VT-GWELEKRTKRPPQ-------NPLNALISFGNSLTYAKVLGEYKTQPTVSYLHEPS-RFSLSLDVAEVFKPIFNLIRLIQENKID---KTHFSLGRKVFLKAFNELLERKVSHRTLIKLELYKLIKHLLE----------------------------------------------------------------------------------------- | |||||||||||||
8 | 3ayfA2 | 0.15 | 0.14 | 0.93 | 0.40 | MRFsearch | --IILVVGMLLWLFIVFRGVKRGLKRE-----------SDKGGLIHLLFYSAIAVPFFYIFAFFIQP----DTNFTMADFWRWWIWVEGIFEVFAVVVIGFLLVQLRLTVRALYFQFTILLGSGVIGIGHHYYYEVWIALGAVFSALEVIPLTLLILEKATFWFLISTAIWNLVGAGVVSYFEHGQFLTPAHGHAAMMGVYGMFAIAVLLYSLRNIVKPEAWNDKWLKFSCWMLNIGLAGMVVI | |||||||||||||
9 | 3mktA | 0.13 | 0.12 | 0.96 | 0.74 | FFAS-3D | -LIKLATPVLIAVAQTGMGFVDTIMA----GGVSAIDMA--AVSIAASIWLPSILFGVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMMVIGFIGLLLNIPLNWIELGGVGCGVATAIVYWIMLLLLLFYIVTSRLGFPVAAALFFEVTLFAVVALLSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRV--- | |||||||||||||
10 | 6w2wA | 0.14 | 0.11 | 0.84 | 0.81 | SPARKS-K | ----------------------------------SEEVNERVKQLAEKAKEATDKEEVIEIVKELAELAKQSTDPNVVAEIVYQLAEVAEELIKEILQEALRLAEEQDEELAEAARLALKAARLLEEARQLLSKDAKECLKAVRAALEAALLALLLLAKHPDAVQLATAALRAVEAACQLAKQYPNS---DIAKKCIKAASEAAEEASKAAEEAQRHPKARDEIKEASQKAEEVKERCERA--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |