Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | ALCHVAVASCLCLATVYTGVFDGVFVQVGYEHYAETPVASLPAFLAMPFNSLINVAYVLLGVYWLQRNASTPERSAEMQRARYLKDVFAAMALVYGPVQWLRIGTQTRPAAVLDQWFTLPIFAWPVAWCLYLDRGWKPRLLLAIECLSLCSYGLALLHPCGFEVALGAHIAAAVGQALRAHGRYGSVCSGVYLALAVLSCLGFVVLKLCDHQLSRWHLFQRLTGHFWSKVCDVLQFHFAFLFLT |
1 | 3rkoB | 0.13 | 0.11 | 0.88 | 1.14 | CNFpred | | LLMYLGWEGVGLCSYLLIGFYYTDPK-------------NGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFLMWATLMLLGGAVGKSAQLP---LQTWLADAMAGPTPVSALIHAA---------TMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQ--TDIKRVLAYSTMSQIGYMFLALGV--QAWDAAIFHLMTHAFFKALLFLASGSVILACH |
2 | 6krzA | 0.09 | 0.08 | 0.89 | 1.17 | DEthreader | | -------------------------PDWLKDNDYLHGHR--IFRIHETGNIWTHLLGFVLFLFLGILTLRPNMYFMAPLQEKVVFGMFFLGAVLCLSFSWLFHTVYESRFSKLAYSGIALLIMGSFVPWLYSFSPPRLIYLSIVCVLGISAIVARFAKHQTRAGVFLGLGLSGVVPTMHFTIAEGATGQMGWFFLMAVMYITGAGLYAARIPERFFGKFDIWQSHQIFHVLVVAAAFVHFYGVS |
3 | 5voxR | 0.09 | 0.04 | 0.48 | 0.62 | DisCoVER | | --YM-WANLGIALCVGLSVVG--------------------------------AAWGIFITGSSMIGA-----GVRAPRITTK-NLISIIFCEVVAIY--------------GL--IIAIVFSSKVATAENMYS----KSNLYTGYSLFW-------------------AG--IT--V---------------GASNLICGI----------------------------AVGITGATAAISE- |
4 | 3ayfA | 0.08 | 0.07 | 0.83 | 0.83 | DEthreader | | ITILISS------------GFVSFLFVSMGQWLGVNG---EWFLLQLGRIWQIILVVGMLLWLFIVFRGVKRGKRESDKGIHLLFYSAIAVPFFYIFAFFIQPTFAD--RW--IH-VEGIFEVAVIGFLLVQLTKKSVRALYFQFTILLGSGVIGIGLGAVFSALEVIPLTLLILEAYEQYKMMRGKATFWFLISTAIWNVGAGFGFLINSYEHG----------------Y---A--VLYS-E |
5 | 3ayfA | 0.06 | 0.06 | 1.00 | 0.49 | CEthreader | | LFWALVVLVGGSMIGQWLGVNGYLGNEWFLLGHQGWEYIELGRIWQIILVVGMLLWLFIVFRGVKRGLKRESDKGGLIHLLFYSAIAVPFFYIFAFFIFTMADFWRWWIIHLWVEGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVIGIGFSALEVIPLTLLILEAYEQYKMMRDGGANFPYKATFWFLISTAIWNLVGAGVFGFLILTPAHGHAAMMGVYGMFAIAVLLYSL |
6 | 4or2A | 0.09 | 0.08 | 0.91 | 0.93 | EigenThreader | | KVKEAQAAAEQLKTTRNAYIQKYLI---PVRYLEWSN-------IESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIATSCYLQRLLVGLSSAMCYSALVTKTNRIARILQVIIASILISVQLTLVVTLIIMEPPMVVAPLGYNGLLIMSCTYYAFKTEAKYIAFTMYTTCIIWLAFVPIYFGSN-----------YKIITTCFAVSLSVTVALGCMF |
7 | 2yzsB2 | 0.17 | 0.09 | 0.54 | 0.39 | HHpred | | ----------EFRKLCYKKLEE-VT-GWELEKRTKRPPQ-------NPLNALISFGNSLTYAKVLGEYKTQPTVSYLHEPS-RFSLSLDVAEVFKPIFNLIRLIQENKID---KTHFSLGRKVFLKAFNELLERKVSHRTLIKLELYKLIKHLLE----------------------------------------------------------------------------------------- |
8 | 3ayfA2 | 0.15 | 0.14 | 0.93 | 0.40 | MRFsearch | | --IILVVGMLLWLFIVFRGVKRGLKRE-----------SDKGGLIHLLFYSAIAVPFFYIFAFFIQP----DTNFTMADFWRWWIWVEGIFEVFAVVVIGFLLVQLRLTVRALYFQFTILLGSGVIGIGHHYYYEVWIALGAVFSALEVIPLTLLILEKATFWFLISTAIWNLVGAGVVSYFEHGQFLTPAHGHAAMMGVYGMFAIAVLLYSLRNIVKPEAWNDKWLKFSCWMLNIGLAGMVVI |
9 | 3mktA | 0.13 | 0.12 | 0.96 | 0.74 | FFAS-3D | | -LIKLATPVLIAVAQTGMGFVDTIMA----GGVSAIDMA--AVSIAASIWLPSILFGVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMMVIGFIGLLLNIPLNWIELGGVGCGVATAIVYWIMLLLLLFYIVTSRLGFPVAAALFFEVTLFAVVALLSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRV--- |
10 | 6w2wA | 0.14 | 0.11 | 0.84 | 0.81 | SPARKS-K | | ----------------------------------SEEVNERVKQLAEKAKEATDKEEVIEIVKELAELAKQSTDPNVVAEIVYQLAEVAEELIKEILQEALRLAEEQDEELAEAARLALKAARLLEEARQLLSKDAKECLKAVRAALEAALLALLLLAKHPDAVQLATAALRAVEAACQLAKQYPNS---DIAKKCIKAASEAAEEASKAAEEAQRHPKARDEIKEASQKAEEVKERCERA--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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