Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VYKISSTEKVQQLERELAAQLAELKAQIEDNGVLKGTPGRAYSSIPVPKDVTYFRREREVILKKVLQVTEAKPLVIQADVMQRELESCWRREYTAASLPLLLHQFFTDRITQLVQSKYLHMLRWKRFCTHSSVIEKLYPLYQ |
1 | 6y1wA | 0.05 | 0.04 | 0.73 | 0.64 | DisCoVER | | LFLDCTGFRAL-LIGQTL-GV--GS--E----DWSRW---LFADSALAV-Q--TE--SVGAP--VTFTRARADRAGWMWRIP--LQHRVGNGLQGRALTTPRAL-RF--T--PN-QR--HR--VW-EKNCV--AL--GLAS- |
2 | 6c75A | 0.12 | 0.10 | 0.80 | 0.83 | DEthreader | | ---------------K-GVK-Y--NI--VTPEIA-PDV--AILD--LPTMPEVARNSGLDVLVHGIEAYTASPSDAMAIKAIKTVYRWLP-LSVKGDARARVHYAAT-MAGI-AFLNARLGLLAFNPVEPKPEIKELYLKYR |
3 | 5cwcA | 0.08 | 0.08 | 1.00 | 0.52 | CEthreader | | VENAKRKGDDTEEAREAAREAFELVREAAERAGIDSSEVLELAEGYDISEACRAAAEAFKRVAEAAKRAGITSSEVLELAIRLIKECVENAQREGYDISEACRAAAEAFKRVAEAAKRAGITSSETLKRAIEEIRKRVEEAQ |
4 | 7c4jF | 0.05 | 0.05 | 1.00 | 0.52 | EigenThreader | | WSDKKADTDTLLYEQIIQRDKINKYSLIRETNGYDPFSIYGFSNKEYISRLWHTLKYYQDLKNTRMKSITSTSQNKNDKIEDFVDDMLRDYRFEDATREQHIDTICQSIQEQIQEAESMCQELESIREQVHMYHKSLALLGY |
5 | 1vt4I3 | 0.09 | 0.08 | 0.89 | 0.44 | HHpred | | -----------ALHRSIVDH-YNIPKTFDSDDLIPPYLDQYFYSLKNIEHPERMTLFRRFLEQKIRHDSTAWSGSILNTLQQLKFYKPYICDNDPKYERLVNA--ILDFLPKEENLICSKYTDLLRIALMAEDEAIFEEAH- |
6 | 1f5nA | 0.17 | 0.15 | 0.90 | 0.37 | MRFsearch | | --KDVDHLFQKELAAQLEKKRDDLEEEVKAG------------IYSKPGGYRLFVQKLQDLKKKYYEEPRMTDAILQTDQTLTEKEKEIEVERVQEHLKQLTEKMENDRVQLLKEQERTLALKKEGFQKESRIMKNEIQDLQ |
7 | 3na7A1 | 0.12 | 0.09 | 0.75 | 0.70 | FFAS-3D | | ----NDKEAKNKAILNLEEEKLALKLQVSKNE----------------QTLQDTNAKIASIQKKMSEIKSER----ELRSLNIEEDIAKER-------SNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL----- |
8 | 6egcA | 0.10 | 0.09 | 0.96 | 0.71 | SPARKS-K | | RELERSLREQEELAKRLKELLRELERLQREGSSDEDVRELLREIKELVEEIEKLAREQKYLVEELKRQGN-----EIIRELERSLREQEELAKRLKELLRELERLQREDVRELLREIKELVEEIEKLAREQKYLVEELKRQ- |
9 | 4aurA | 0.12 | 0.11 | 0.87 | 0.56 | CNFpred | | -----HLDELNTFVEKNDEDMHRFSNDIKQSRI------------EVKRLAGELFEELNLMEKQLMSQLRPLDLDDIRPFMDDELGYTED--GVGFKLHLRIKQSVDRFFEQSTAVSQRLSDDITRQLSSESFLSGLGEGAF |
10 | 6oqqA | 0.09 | 0.08 | 0.88 | 1.00 | DEthreader | | SFNPMFRETNF-YHSTLTDNLLLRT-EP---K-EVTLS----------RLDVDVLLRSEAIHQSALTLLKQANIEKHFRQTQFWDYSKLDEKLSGVGLHQDLGSPL-RELEKLLYATVTLIEGTMQLDKEFFKQLEQVEKIL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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