>PF15068 (203 residues) MVGRLSLQDVPELVDTKKKGDGVLDSPDSGLPPSPSPSHWGLAAAAGGGGERAAVPGALE PDASATPAAPNPASLTHVLAAGCSPRLCPLSFGEGVEFDPLPPKEIRYTSSVKYDSDRHF IDDVQLPLGLAVASCSQTVTCIPNCTWRNYKAEVHFEPRHKPARFLSTTIVYPKYPKTIY TTTLDYNCHKKLRRFLSSVELEA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MVGRLSLQDVPELVDTKKKGDGVLDSPDSGLPPSPSPSHWGLAAAAGGGGERAAVPGALEPDASATPAAPNPASLTHVLAAGCSPRLCPLSFGEGVEFDPLPPKEIRYTSSVKYDSDRHFIDDVQLPLGLAVASCSQTVTCIPNCTWRNYKAEVHFEPRHKPARFLSTTIVYPKYPKTIYTTTLDYNCHKKLRRFLSSVELEA | |||||||||||||||||||
1 | 3x0tA | 0.08 | 0.04 | 0.47 | 0.57 | DisCoVER | YSHDWTVE-PNGGV----------------------TEVDSKHTPI-------------------------IPEVG-------------RSVDIENTGRG-----E-LTIQYQWGAPVAKSHV------------------------------VQR--------DETYHLQRPDNAFYHQRIVVINNGA-SRGFCTIYYHLE- | |||||||||||||
2 | 1urjB | 0.08 | 0.06 | 0.73 | 0.67 | DEthreader | --------ARS--SDVAV---APLVVLTVELVVTEFKEACINTVYPLQLFSRVIAE-PFNA-NH-RSIGFTYPLPFFNLNRLFEVPAES-VFDEPPTLAAVMVSAVFGTMN----------SMYSMSL--VGFLSAKTLTVALSEDVVTLGFPELRVKSRVLR--------------------PMVVLVLACPRAVC------ | |||||||||||||
3 | 1sdwA2 | 0.06 | 0.03 | 0.56 | 0.64 | CEthreader | -------------------------------------------------------------------------------------IAGMYLMMSVDTVIPPGEKVVNADISCQYKMYPMHVFAYRVHTHHL--GKVVSGYRVRNGQWTLIGRQNPQLPQA--FYPVEHPVDVTFGDILAARCVFTGEGRTEATHIMCNLYIMY | |||||||||||||
4 | 1nx9A3 | 0.07 | 0.06 | 0.98 | 0.80 | EigenThreader | --DGWMGDDWFHYGAQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYHPAYDAFWQGQSVCESNCTGGLTPLYLADPAAVSDPARPDVVTYETRVSGVP--VADLFAATSGTDSDWVVKLIDVQPKMGGYELPVSMDIFRGRALQPDATLHYHFTLPAKGHRIMVQIQSSYTVATQSIHHGILLPV | |||||||||||||
5 | 3cmbB | 0.17 | 0.10 | 0.57 | 0.28 | HHpred | ------------------------------------------------------------------------------RPQDDFTY-LPVHFG-GGKFDPETLVTQATALSLSFETERDLLENY-IPEGFELLAVQVAFNKFTEINWGQYNLINVAAPRFIPKIYADIED--LHIVRPHFATTVSYEGN---TFLN-DFEATG | |||||||||||||
6 | 5awfA | 0.11 | 0.05 | 0.48 | 0.58 | MRFsearch | -------------------------------------------------------------------------------------------------------ILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRG-DNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISA-GHSQNSYRGLVKIM- | |||||||||||||
7 | 1guiA | 0.15 | 0.11 | 0.74 | 0.46 | FFAS-3D | -------------------NNGTFDEPIVN-DQANNPDEWFIWQAGDYGISGARVSDYGVRDGY-----------AYITIADPGTDTWHIQFNQWIGL--YRGKTYTISFKAKADTPRPINVKILQNHDPWTNYFAQTVNL--TADWQTFTFTYT----------------HPDDADEVVQISFELGEGTATTIYFDDVTVS- | |||||||||||||
8 | 3gf6A | 0.13 | 0.11 | 0.88 | 0.63 | SPARKS-K | PVGDVDIERGGPALEVGNEEDYVLDTPTLGKLTFIDLKNQQKDQNVADFNGVG------------KSKLTSLGYKDGNYPSESQVPIYTSQ-------DVTAKYKLRLKGELLVSGDE-WIDYVYAQLASLFQPYFPEVFCKGDSFRRTCTFDITYDRSDSFSQLYFNLFINLAGQKRENRVRLRID---KESYFELYEQSE- | |||||||||||||
9 | 4wz9A | 0.14 | 0.07 | 0.54 | 0.97 | CNFpred | --------------------------------------------------------------------------------------SIPIHYDLHLRTEIH-RNERTFTGTVGIQLQVQATDKLVMH-NRGLVMSSAKVSSLPNAPTLIGDVQYSTDT-----TFEHITFTSPTLQPGTYLLEVAFQGR-DDGFYVSSYVADN | |||||||||||||
10 | 5u1sA | 0.06 | 0.04 | 0.70 | 0.67 | DEthreader | YSK-----------LMIIVKEILFN------ETN-LFQANILKLALQIIKRLEY---K-NIESCFFTYSSLRGINLDLTTNS---NFDSLYIAKLQLTAKIEQALLHSSINVHDS-------------SLYIKVINIFSALIKAGNSAIDKALASLKKNKLSQSRLLLFSQLKIIR-----------------------TFLL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |