Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MAAIPSSGSLVATHDYYRRRLGSTSSNSSCGSAEYPGEAIPHHPGLPKADPGHWWASFFFGKSTLPFMATVLESPERSESPQASSGSIACDLALETMRKQPGGQPGKANT |
1 | 6w1cE2 | 0.07 | 0.05 | 0.62 | 0.57 | DisCoVER | | PEALVRSKREATLSLHPIHP---TLLSYRTFGAERVFDEQWITAQTE------VTIPVPVE---GVEYQWGN------------HKPQR--FV--V-------------- |
2 | 5oqlO1 | 0.02 | 0.02 | 1.00 | 0.54 | CEthreader | | WKERVYAAFGDPRNGEPQGLWVFQRGKKVAELPLPSDQILIFGGWIVACALTRIEVWKAATLEHYTTIFPAASKKGDNELTGGAINMPTFLNKIFVVEIWNVSTGKLIYT |
3 | 2owoA2 | 0.07 | 0.06 | 0.93 | 0.57 | EigenThreader | | THCPVCGSDVERVVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGLTAGKLTGL--------ERMSAQNVVNALEKAKETTFARFLYALATAAGLAAYFGTQKVPDVGI |
4 | 4xhfA | 0.14 | 0.12 | 0.84 | 0.29 | HHpred | | -----------NDARVFKVFDSGKSSVVPFYGKGLWSYEHGETPGIGDFVTDPHWLSLWKGKQLFDAMRLVKGGVDIHGVDAVSGATMTGRGVQRAMEFWFGV------- |
5 | 2pffB | 0.08 | 0.02 | 0.23 | 1.08 | MRFsearch | | --------------------------------------------------------------------------DDDYGFKQGGDLYKTSKAAQDVWNR----------- |
6 | 2xkxA4 | 0.17 | 0.13 | 0.75 | 0.37 | FFAS-3D | | LRSNPKRGFYIALFDY-----------DKTKDCGFLSQALSFRFGVIDAGDEEWWQARRVHS----------------DSETDDIGFIPSKRRVERREWSRLKAKDWGSS |
7 | 2g3pA2 | 0.06 | 0.05 | 0.80 | 0.82 | SPARKS-K | | --------------------INPLDGTYPPGTEQNPANPNPSLEE--SQPLNTFMFNRFRNRQGALTVYTGTVTQGTDPVKTYYQTPVSSKAMYDAYWNGKFRDCAFHSG |
8 | 5oe0A | 0.13 | 0.05 | 0.43 | 0.63 | CNFpred | | ---------------------------------------------------IGWWVGWVELDDNVWFFAMNMDMPTSDGLGLRQ--AITKEVLKQEKIIP---------- |
9 | 6jhpA | 0.07 | 0.06 | 0.87 | 0.83 | DEthreader | | ----AGDFPEDASVSFHYRKIRSKY----FG-WVEPE-MVNSYREHPD--W--VLHAYPRTERQLVLNLVQDFIIDFTNLLYVKWDWEFPQISTGNVIGDLYLALYVLLQ |
10 | 3zxaC2 | 0.13 | 0.11 | 0.84 | 0.56 | MUSTER | | ---------SAQIGDFAGVKDGPRLVSWSKTKGTAGWEHDCHFLG-----TGNFSLTLFYEKAPVSGLENADASDFSVLGEAAAGSVQWAGV----KVAERGQVTTEEQP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|