Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LVGEIAFQLDRRILSSIFPERVRLYGFTVSNVPEKIIQASLNPVTRKLDEEQCQVLTQRYVSVMNRLHGLGYDSKMHPALTEQLVNTYGILRERPELTASDSGAYNSMDFLKRVVVETVPPGLLTDALLLLSCLSQLSQDDGKPMFIW |
1 | 3owoA2 | 0.08 | 0.06 | 0.80 | 0.61 | DisCoVER | | GMDALTHAFEA--Y-SSTA--ATTDCALKAASM--IA-KNLKTACDNGKDMPAREAMAYA--Q-------------------FLAGMAFNASLGYVHAMVLAYNAVVAGRLKDVGVAMGLDIANLGDKEGAEATIHALKDACALTNP- |
2 | 1yrlA | 0.12 | 0.10 | 0.86 | 0.83 | DEthreader | | LMGEQTILGML-AG-LLCDKLAIGWEIT--L--GGITLMMDRLS--AKAYALSEQLKEIMAPLFQKHDI-EFSSGMMDWDDKKLLTWREETGKTA-ETAPQY-------I--KRLYEMNVVISDTAEYGNYLFSYACVP-LLKP-MDL |
3 | 3mzvA | 0.07 | 0.07 | 0.97 | 0.51 | CEthreader | | LRPMLTLAAARLVGYGGPFHVHLAATVEFIHTATLLHDDVRTANLLWDNKSSVLVGDYLFARSFQLMTD--TGNMRVMEILANASAVI---AEGEVLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGIIGGAPEDQVQALFDY |
4 | 2ejnA | 0.06 | 0.05 | 0.84 | 0.58 | EigenThreader | | ---------MEICPAVKRDVD----LFLTGTPDEYVEQVAQYK----ALPVVLENARILK-----NCVDAKMTEEDKENALSLLDKIYTSPLCVKMAETCPIFYDVFFAVANLLLDLSLTEPERTAMKKIQDCVMTTISS--SKDCMG |
5 | 1kfuL | 0.18 | 0.16 | 0.86 | 0.32 | HHpred | | --AEIAFEL-QTILRRVLAKRQKSDGFSI-ETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKI-------------YREIDVDRSGTMNSYEMRKALEEAGFKPCQLHQVIVARFADDQLIIDCLVRLETLFKIFKPENTGT--- |
6 | 3s4wA | 0.15 | 0.14 | 0.93 | 0.42 | MRFsearch | | --SLLSLKFVSDLLTALFRDSGEFMHYAVNVTLQKIQQLIRTGHVSGPDGQNPDKIFQNLCDITRVLLTFSVVLQFYQPKVQQFLQALDVMGTEEEEAGVTQRASFQIRQFQRSLLNLLDDFNSKEALLLIAVLSTLSRL-------- |
7 | 5hb4B7 | 0.13 | 0.13 | 0.96 | 0.68 | FFAS-3D | | FKSTPKMAFLLQALQAILPTLEAFSSLKSDEAFELVAKVLLWKLDFGLDREQFTVLFQLFQLCLSAISQCSGTPELRSLYYSICYRYLTAVVDTRSVTNARARTLKAITLYGDRLLNVIDTTCQTAAMILLNALVHTSRASS------ |
8 | 3kyjA | 0.13 | 0.11 | 0.83 | 0.62 | SPARKS-K | | -----------------MDEIWALYADDGAQALDAMEASLLALQAGEDAAAHVGPLFRAVHTFKGNSRVLGL--SVVESRAHLCEDLIGLVRDA-GVPMDGEIVLFASDTLRAMLEETAADVEGTGSEALMDQLRSKIARCSR----- |
9 | 4fgvA | 0.17 | 0.13 | 0.77 | 0.60 | CNFpred | | EHRVEFFNLLRAINLYCFPALLKLDNRQFKFVIDSCMWASKH------NRDVETAGLNMCLELINNIAEK-TDVQTCNAFFNQFFIRI-------------------LQDVFFVLTDTDHKAGFKTQSMLLMRLFYFVHP-------- |
10 | 6v3fA | 0.06 | 0.05 | 0.82 | 0.83 | DEthreader | | QVVPFLVLAVGADNIIPSMLLSLEAFFGLALCFVPTFVVCYLL-LGL-DMCSGILNLLSIIMILVDTIGLMAYNAVSLINLVTA--------------------AMTNFPGILILGFAQAQLIQIFFRLNLLITLLGLLHGLV----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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