Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KKKCDVGLDRGPHIVLWTIICLPIIFIVSFVVSFYYGTITWYNIFLVYNEERTFWHKITFCPFLIIFYPIIIMVVSFSLGLYSAVTQVSWSFGDWWHAVRDMEKGFCGWLCSKLGLEDCSPYSIVELLDS |
1 | 1tqqA | 0.05 | 0.04 | 0.79 | 1.00 | DEthreader | | --NPELRDQLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFGLVAITDVQ-NARAQYDTVLANELTARNNLDNAVEQLRQIT----------T-SSNNINQLNI-----TLNEL-------- |
2 | 3v0aB | 0.06 | 0.05 | 0.96 | 1.17 | DEthreader | | --KKENLWTQYYSQYFDLICMAKRSVLAQETLIKRIIQKKLSYLIGN-SN-IS-SDNLALMNLTTTNTLRDISNESQIAMNNVDSFLNNAAICVFESNIYPKFISFMEQCINNIKTVFNSLFEFLNIQKS |
3 | 5x5yG1 | 0.07 | 0.05 | 0.67 | 0.90 | DisCoVER | | ---------DRIGVTVFVAIL-AVLGVI--LGLALLFAFIDELNDI---SASYGIGDA--LRFIFLTAPRRAYDM--LPMAA--L----------------I---GCLVGLGTLELLSRIAVKPMLM--- |
4 | 1yc9A | 0.05 | 0.04 | 0.83 | 1.00 | DEthreader | | -SPSLCSARLSTSIANAYAELARLYANQETVHAALQVRNKTVELLEKRYGLETLGSVS-QAKAVAASVEAELLGIQESIQLQKNALAALVG---------E-DVSRFSLDLAL-IH-LGGGF-------- |
5 | 5a63C | 0.08 | 0.08 | 1.00 | 0.52 | CEthreader | | KADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMG |
6 | 4chvA | 0.08 | 0.08 | 1.00 | 0.62 | EigenThreader | | LLDGSPDWSLYCAVWLLKPLRDSPVLGRVLANELFGVVLFAVALAAYVIERDIIPQAMWWAVVTLSTGIFGLWAGILATGFYQEVRRGDFVRNWQLVAAVSVSVATFGEMALISGEPRSATVSAASLHSA |
7 | 6hcyC | 0.13 | 0.10 | 0.75 | 0.38 | HHpred | | ---------------LFPMWRFPFYLSAVLCVFLFFYCVIRDVIYPYVYEKKDNTFRMAISIPNR-IFPIALTLLAYLPGVIAAILQLYRGLDHWMLCRKQ--LGLVALGFAFLH--------------- |
8 | 4chvA | 0.04 | 0.04 | 0.92 | 0.55 | MRFsearch | | ---------NEARNLIGVTTLFGVVLFAVALAAYVIEQAMWWAVVTLSTTPQSFAGRVLAGAVMMSGIGIFGLWAGILATGFYQEVRRGDFVRNWQLVFQKLGPAVLVEIVRALRARTVPAGAVICRI-- |
9 | 5vreA | 0.15 | 0.10 | 0.68 | 0.58 | FFAS-3D | | ----------GVFAIAITLLVLEIPSYLAFLTSFASILVMWVNHHRIFSLVARTDHAFFYWNGLLLMLPFPTALLAVAASVYAGIFLAIAIVFNRLWKH------------------------------- |
10 | 1gakA | 0.07 | 0.07 | 0.95 | 0.83 | SPARKS-K | | FDDVVV---SRQEQSYVQRGMVNFLDEEMHKLVKRFRDMGFVFLLKKVNRERMMRY----CMDYARYSKKILQLTLTKMGRFVGYRNYGVIRELYADVFRDVQGFRGPKMTAAMRKYSSKDPGTFPCKNE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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