Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MSWWRNNFWIILAVAIIVVSVGLGLILYCVCKWQLRQGKKWEIAKPLKNKQADEEKMYENVLNESPVQLPPLPPRNWPSLEDSSPQETPSQPPPTYSLVNKVKNKKTVSIPSYIEPEDDYDDVEIPANTEKH |
1 | 3jc8Oa | 0.12 | 0.11 | 0.95 | 1.21 | SPARKS-K | | MDKYLDQFVKFGGLAFVVGALTAANFFMVIQPTEEEIGWAVAERRKLDLELADKSEIAQNLEQKLSEALTELPEQRDIEKSGLELSSVTPGKESV------GGGEFFARIPIKMTVSGNYHEILFLQEMANM |
2 | 6z9lA | 0.08 | 0.06 | 0.80 | 1.00 | DEthreader | | QALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEKVRQTATAEKSLQQTKDQLATINELIQNRALAKTNVAEAIQTSAVLKEKQEAENTNSLKEVLAKLNK-------------------------- |
3 | 3jc8Oa | 0.09 | 0.05 | 0.61 | 0.91 | DisCoVER | | GSGLELSSVT------P--GK--E---S-------------------------------VGGGEFFARIPIKMTVSGNYEIALFLQEMANMRRIVNVNNIKFDSAKLKNEKVVLQS--EF-QATTFRF---- |
4 | 4aw6A | 0.05 | 0.04 | 0.84 | 0.83 | DEthreader | | LAMPAEKRIFGAVLLFSWTVYLWETFLAQRQRRIYKTT-THVPDSET--FEKSRLYQL-KS--------SETEGIGILWSTQSSLYIAFTLQSCF--F--LIGRKQPTL----IGLLIIQFIFSYNELSLL- |
5 | 6mjpF | 0.06 | 0.06 | 1.00 | 0.41 | CEthreader | | IRAALYLALITASVAAFNALWLAPWSQDKEAHLMEQFADLLQKGHFQRSPSVVFIDNIENRKLYNVFVAQLAPRDSILPSVMFSHSGDVKEDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQERDW |
6 | 6wlvA | 0.05 | 0.05 | 1.00 | 0.45 | EigenThreader | | EEPHWKEAKKNYYTQKLHLLKEQVVSDAADQGPNAMIFAATVITTIGYGLFGVPLCLTWISALGKFFGGRAKRLGQFLTSLRKAQITCTAIFIVWGVLVHLVIPPFVFMVTEEWNYIEGLYYSFITISTIGF |
7 | 6wvgA | 0.19 | 0.14 | 0.77 | 0.60 | HHpred | | RLWFHSNFLYIGIITICVCVIVLGMSFLTLNSQIDKTSHNYITANGANHNVEDGSVLADHQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLEFV------------------------------ |
8 | 6wvgA | 0.19 | 0.14 | 0.76 | 0.32 | MRFsearch | | -LWFHSNFLYIGIITICVCVIVLGMSFALTLNSQIDKTSNFKIRHNVEDGSVQLADHYQQNT--PIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLEFVT----------------------------- |
9 | 5lcwS | 0.09 | 0.08 | 0.97 | 0.38 | FFAS-3D | | ----PRFLNLWLKLGDMYSYLHLAQFYISWAEEYEARENFRKADAIIQQKAEPLERLQSQHRQPQRSTLAELKSKGKKTARNRGLQNPFPQQMQNNSRITVFDENADEASTAELSKPTVQPWIAPPMPRAKE |
10 | 5yfpC2 | 0.12 | 0.11 | 0.98 | 1.15 | SPARKS-K | | ISKFDKLLDGLTYDIVEMAAIRLFKIYDLEEREDLRIEAIRNIIKKKEIEIEKSSIKKLPNSKNTARLQDETPKVIEYPTNKGLYQEIMSGTISTRTAPRGYKHFLINGINNSIS--EMFGEMREKYVGDQK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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