>PF15037 (390 residues) VLRCHQETDCDLCVRVAIHLAVHGHWEEPKDEDKLGIAADPELEEPRNAFLQAQVVLSFQ AYPTARCVLLEVQVRAALARPGQSVGSVVFDCFEAALGAEVRLWSYTQPRYQKELNLTQQ LPDCKGLEVRDSIQSCWALPWLSVSADGDDVHLVLDVSEEQHFGLSLYWNHVQGPTKPWW HSNLTGPQNITLNHTDLFPCLCIQVWPLEPDSVRTSLCPFREDPRAQGNLWRAARLRLLP PWGWQLNAPCSLLAEATLCWQAPGGGPCQSLVPPLSRTNVTVNKTLELPLLNAHPNLCVQ QVSSWEKLQLQECLWADSLGALKDDMLLVETRGPQDNRSLCALEPSGCTPLLSRASTRAA HLGEQLLQDLQSGQCLQLWEDDLRALWACP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VLRCHQETDCDLCVRVAIHLAVHGHWEEPKDEDKLGIAADPELEEPRNAFLQAQVVLSFQAYPTARCVLLEVQVRAALARPGQSVGSVVFDCFEAALGAEVRLWSYTQPRYQKELNLTQQLPDCKGLEVRDSIQSCWALPWLSVSADGDDVHLVLDVSEEQHFGLSLYWNHVQGPTKPWWHSNLTGPQNITLNHTDLFPCLCIQVWPLEPDSVRTSLCPFREDPRAQGNLWRAARLRLLPPWGWQLNAPCSLLAEATLCWQAPGGGPCQSLVPPLSRTNVTVNKTLELPLLNAHPNLCVQQVSSWEKLQLQECLWADSLGALKDDMLLVETRGPQDNRSLCALEPSGCTPLLSRASTRAAHLGEQLLQDLQSGQCLQLWEDDLRALWACP | |||||||||||||||||||
1 | 6ac6A | 0.05 | 0.04 | 0.73 | 0.67 | DEthreader | RALAQNGPVFRVVVTLLQPA------RAAALAAE-HPVTVPDLAKLAPVDGE-------------------ALLPLLHP----IEPTTLTHLAPVLVCDPVRALIGREFLEAGGFVTFRWWTLS----SAV-ELD-IRSAPSARGSQHLEFALRAHV-T--GGYAAVVTPGIA-LEPGTAPKAG----VVGV-K---PLCSGVVLPGAN----LVIITETD-L-TGNR--EEDAFGLAIQEVDDRV-----------KQVAVTVKGIELK-------------------------GLIIVE----EHIKSRDVLT-SATP-PEERYPVLTYV--GPHDVFYIVFYDILVCTTVADTFGLSQLHQLRGRVGRSE-GYAYFLYPP--IA--- | |||||||||||||
2 | 5dmyA | 0.04 | 0.03 | 0.76 | 0.83 | DEthreader | -----------------------------VDSKQNRTSFIKRIADHGNNGVAIKTPSLATQN---VTMNLTTKVANDTAAANITLKQTIAASPKLWSIPNLYTVRTEVLTVLDTYDTEYGFRWTGFDATSGFSLNGKVKL-GVSMHD---RTTHESLLVANLVVGTNYS-DGANYDKIRTTHSW----SETASAAVASAWYDV----------FVAGTYV--GFGIVPKDTYYFLPVAKGGNKVPVVVYTDAAKVKLYFTPKG----STEKRLIGEKSFVYHKNLTWNV--PWAE-GTISAEAYDISTEGNASVTTTGKA--AKLKAD-D-------IEVDVAANKFSKVLAI----------TVT-AKADGLQSS-------------- | |||||||||||||
3 | 6hg4B | 0.82 | 0.78 | 0.95 | 20.77 | HHpred | VLRCQKETDCDLCLRVAVHLAVHGHWEE------------------RNASLQAQVVLSFQAYPTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELQHTQQLPDCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLQVSEEQHFGLSLYWNQVQGPPKPRWHKQLTGPQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEQVTVDKVLEFPLLKGHPNLCVQ-VQSSEKLQLQECLWADSLGPLKDDVLLLETRGPQDQRSLCALEPSGCTSLPSKASTRAARLGEYLLQDLQSGQCLQLWDDDLGALWACP | |||||||||||||
4 | 6hg4B1 | 0.08 | 0.03 | 0.38 | 0.94 | DisCoVER | ----------------ERLVG-P----------------------------DATHCSP--------------------------------------GLSCRLWDSDILCLPG-------------DIVPAPGPVLAPTHLTELVLRCTDCDLCLRVA-----VHLAVHGHWEERNASLQAQVVLSRCVLLEVQVPAAL-VQFGQSV--------------------------GS-----------------------------------------------------------------------------------------VVYDCFEAALGSEVRIWSYTQPRYEKELQHTQQ-----------------------LPDCVWNSIP- | |||||||||||||
5 | 6hg4B | 0.82 | 0.78 | 0.95 | 1.47 | MRFsearch | VLRCQKETDCDLCLRVAVHLAVHGHWEER------------------NASLQAQVVLSFQAYPTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELQHTQQLPDCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLQVSEEQHFGLSLYWNQVQGPPKPRWHKQLTGPQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEQVTVDKVLEFPLLKGHPNLCV-QVQSSEKLQLQECLWADSLGPLKDDVLLLETRGPQDQRSLCALEPSGCTSLPSKASTRAARLGEYLLQDLQSGQCLQLWDDDLGALWACP | |||||||||||||
6 | 6hg4B | 0.81 | 0.77 | 0.95 | 3.62 | SPARKS-K | VLRCQKETDCDLCLRVAVHLAVHGH------------------WEERNASLQAQVVLSFQAYPTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELQHTQQLPDCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLQVSEEQHFGLSLYWNQVQGPPKPRWHKQLTGPQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEQVTVDKVLEFPLLKGHPNLCVQVQSS-EKLQLQECLWADSLGPLKDDVLLLETRGPQDQRSLCALEPSGCTSLPSKASTRAARLGEYLLQDLQSGQCLQLWDDDLGALWACP | |||||||||||||
7 | 6hg4B | 0.67 | 0.61 | 0.91 | 1.71 | MAPalign | VLRCQKETDCDLCLRVAVHLAVHGHW----------------EERNASLQAQVVLSFQAY--PTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELQHTQQLPDCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLQVSEEQHFGLSLYWNQVQGPPKPRWHKQLTGPQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEQVTV--DKVLEFPLGHPNLCVQ-VQSSEKLQLQECLW-----------ADSLGPLKDDVLLLETRGQDQRSLCALKASTRAARLGEYLLQDLWDDDLGALWACPMDKYI--- | |||||||||||||
8 | 6hg4B | 0.82 | 0.78 | 0.95 | 2.16 | CEthreader | VLRCQKETDCDLCLRVAVHLAVHGHWEE------------------RNASLQAQVVLSFQAYPTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELQHTQQLPDCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLQVSEEQHFGLSLYWNQVQGPPKPRWHKQLTGPQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEQVTVDKVLEFPLLKGHPNLCVQVQSS-EKLQLQECLWADSLGPLKDDVLLLETRGPQDQRSLCALEPSGCTSLPSKASTRAARLGEYLLQDLQSGQCLQLWDDDLGALWACP | |||||||||||||
9 | 6rw8A | 0.11 | 0.10 | 0.93 | 0.64 | MUSTER | GMYCDYEKD-----VIIVYFHEKKDNYSFNSLPAREGNPDMTLSILTENDLDAIVKSTLSELDTRTEYKVNNQFATDYITTKNKLASFTGNIFDLSYISNLTFNPSMEINFDKNISFLLKNGSDILVELNDHVASKPSHESDPMVYDFNQVKVDI---EGYDIPLVSEFIIKQDI-------VIESPIHIKLKSKDTSNVISLHKMPSGTQYMQIGPYRTRLNTLFSRKLAERANIGIDNVLSMNLPEPQLGEGFYATFKLPPYN-------KEEHGDERWFKIHIGNIDGNSARQPYYEGMLSDIETTVTLVPYAKGYYIREGVRLGVGYKKIIYDAFFYFDETKNQFIFINDADHDSGMTQQGIVKNIKKYK-------GFIHVVVMK | |||||||||||||
10 | 6hg4B | 0.82 | 0.78 | 0.95 | 3.35 | FFAS-3D | VLRCQKETDCDLCLRVAVHLAVHGHWEE------------------RNASLQAQVVLSFQAYPTARCVLLEVQVPAALVQFGQSVGSVVYDCFEAALGSEVRIWSYTQPRYEKELQHTQQLPDCRGLEVWNSIPSCWALPWLNVSADGDNVHLVLQVSEEQHFGLSLYWNQVQGPPKPRWHKQLTGPQIITLQHTDLVPCLCIQVWPLEPDSVRTNICPFREDPRAHQNLWQAARLRLLTLQSWLLDAPCSLPAEAALCWRAPGGDPCQPLVPPLSWEQVTVDKVLEFPLLKGHPNLCVQVQS-SEKLQLQECLWADSLGPLKDDVLLLETRGPQDQRSLCALEPSGCTSLPSKASTRAARLGEYLLQDLQSGQCLQLWDDDLGALWACP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |