>PF15029 (234 residues) DDFPHNVFSVTPYTPSTADIQVSDDDKAGATLLFSGIFLGLVGITFTVMGWIKYQGVSHF EWTQLLGPILLSVGVTFILIAVCKFKMLSCQSCKESEERTLDTDQTLGGQSFVFTGINQP ITFHGATVVQYIPPYASQDTIGVNATYLPPLVNPFGAANSGGPTVPAPSPPQYCTIYPHD NAAFIDDDLYPAYMDMDHRNDNRSSTDAEQLEEIQLEDNSRDCFSPPSYEEIYS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | DDFPHNVFSVTPYTPSTADIQVSDDDKAGATLLFSGIFLGLVGITFTVMGWIKYQGVSHFEWTQLLGPILLSVGVTFILIAVCKFKMLSCQSCKESEERTLDTDQTLGGQSFVFTGINQPITFHGATVVQYIPPYASQDTIGVNATYLPPLVNPFGAANSGGPTVPAPSPPQYCTIYPHDNAAFIDDDLYPAYMDMDHRNDNRSSTDAEQLEEIQLEDNSRDCFSPPSYEEIYS | |||||||||||||||||||
1 | 5mqcA | 0.06 | 0.04 | 0.62 | 0.72 | DisCoVER | LIKRVNFR-----------------------------------------KATTKRISDTFDINSL--I----------E-----A-PRLDIAQYVDTETKEAKYGFS-YFWSAPTTLNIVA--EMYALYRGGVRVKVVTEGVDFV-RATVSPQQSTPLAIEQIPGVAEFQIPYYSSSFRYS-SGR----NNLDIAT------------------SP--PSINRYYAVGAGDMD- | |||||||||||||
2 | 4av3A | 0.09 | 0.06 | 0.75 | 0.83 | DEthreader | LLAAGGGS--------------------GFALLGLVLYAGCSIIADRVGGVYTKAADMDDGDVGVAGLGADLLESFVGAIVPFALGCSMGILYVIVK-----RENISLWTSA-----LGMLSFV-TSVDSYPIDNG------AVTKAAMKMVDE--YNRCIEITS--------------AILTANSGGAWDNAKKY-L---AGNLEGYSEPHKALVIGDTV-GDP-KDTVGPDI | |||||||||||||
3 | 4ci8A2 | 0.06 | 0.06 | 0.95 | 0.59 | CEthreader | PTGETVYFIASVVVLYNVEEQLQRHYAGHNDDVKCLAVHPDRITIATGQVAGTSKDGKQLPPHVRIWDSVTLNTLHVIGIGFFDRAVTCIAFS---------KSNGGTNLCAVDDSNDHVLSVWDWQKEEKLADVKCSNEAVFAADFHPTDTNII--VTCGKSHLYFWTLEGSSLNKKQGLFEKQEKPKFVLCVTFSENGDTITGDSSGNILVWGKGTNRISYAVQGAHEGGIF | |||||||||||||
4 | 1ij5A | 0.06 | 0.06 | 0.87 | 0.65 | EigenThreader | ----------------------EIFSQELTQREANVKKVHENLEELQKKLD---HTSFAHDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGQLFLSSAVKFSRMSYITLV----AVANDLAALVADFRKIDTNSNGADEDESDDEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKK--FEHQFSVVDVDDSKYQEFVMLVLLMFH | |||||||||||||
5 | 1u1iA | 0.21 | 0.12 | 0.58 | 0.37 | HHpred | ----------ANFTPSPSAPHAGNDGKTGETLVKTTLAPMFAYRNMEVVGWMSYNI---------L-------GDY-------DGKVLSARDNKESVLSKDKVEMLG-Y----------S--PYSITEIQYFPSVDNKTAKGGKLMKFYFIWDAIDAIVKKGVKGVVKEM-AFFFKSPMDTN---------------------------------------------------- | |||||||||||||
6 | 6hwhX | 0.22 | 0.06 | 0.25 | 0.60 | MRFsearch | -------------------------WAGTTALVLTTGLTLITGTFFRFVARR------HSWWPILILPWLIAAGVAFVITSVCGLVFEY------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6s7oC | 0.16 | 0.05 | 0.31 | 0.33 | FFAS-3D | ---------LEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLFMGFGVLFLLLWV-------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 4btgA | 0.11 | 0.10 | 0.95 | 0.85 | SPARKS-K | WQFAKEITAFTPVKLANNSNRFLDVEPGISDRMSATLVSAFVKNRTAVYEAVSQRGTVNVERDYALDPMVAIAALRTGSMFNYYAAVMHYAVAHNPEVVVHQGVAAEQGSLYLVWNVRTEIPV---------GYNAIEGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLDLANHIHIWPWHEA--STEFAYEDAYSVTI-RNKRYTAEVKEFELLGLGQRRERRILKPTVAHAII | |||||||||||||
9 | 4xptA | 0.15 | 0.04 | 0.26 | 0.79 | CNFpred | ----------------------------GIPLFYMELALGQHNRKGAITCWGRLVPLKGIGYAVVLIAFYVGFYYNVIIAWSLRFFFAS------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6klcA | 0.05 | 0.04 | 0.80 | 0.67 | DEthreader | ----------------IEGQFLKV-EKNQLLNEFNNLVEKDSVHLTHQFKRARYANMGDVDLLDSLTKMILISLLQLRYFIMAYVSDYYHKDPSYKKPGVS-------------NAILMKNVS---AHVSYSM-----LFLTVLQNLIFIKGRDYLSTLLTS-FYLIRFINASIGVAERFFVWGDE-----VPLLTNGVPVHLCNLIQIRTLSLLQRYPILVYIKSIQSLI--- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |