Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | SDTHRPRHDSNLEIYKRLFETKRKDQLNALKNLVELNDINQQYKIIDIMLKGLFKVLEDSRQVLVAANMQPDDPFPMDDKIKEAYSHVVENTAFFGDVALRFPRIVHHYYDRNTDWSSLLRWGLNFCNQTGVFTGGAHQHVLTLMSQELGITEKSPDFINPYRTERDDVLHTAEAFQKILREEEKRRRKEEKRKEIRKGPRIS |
1 | 1bg1A1 | 0.03 | 0.01 | 0.54 | 0.58 | DisCoVER | | --------------------------------------LEQHLQDVRKRVQDLEQKMKVVENLQDDFNYTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQ-SLAESQLQTRQQIKKLEELQQKV-DP----IVQHRPMLEERI------------------------------------------------VLFNL- |
2 | 5y5aA | 0.06 | 0.05 | 0.86 | 0.83 | DEthreader | | --QSL-S--DAHRILDLTWKHHYPIFKYFQNWRNRNVPNYGHRQLNSILQKFPQIHK-YYSLEIFANYNLIPSIDCV---MA-SQRCLLYIGCSQRYKIIMHLSDRYQQAD----FQ-KPLRYLDIASTIVPS-VGETFLQRGICYTHTKNGNAAVFNLGSLKKLNSLLFYILIDLILLIGEMLKTRLVGK------------ |
3 | 3ea5B2 | 0.05 | 0.05 | 0.92 | 0.48 | CEthreader | | NSLEEDFRRYSDAMMNVLAQMIRELKPAVLSVFGDIASGADFIPYLNDIMALCVAAQNTKPE----------------NGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKRTRSGQLFSQATKDTARWAREQQKRQLSL- |
4 | 4kf7A2 | 0.11 | 0.10 | 0.92 | 0.83 | EigenThreader | | AEAPSNEKSALDIYTRMLSDPFASMCRILSAALV--SDNESSELITGLLVKLFGKRLEVNLM---------AGALGYLS-----ADELIEGISLLATVLRAETLRSLTEASRLLSIMNVVCDTLDSLVEEEDGPKTAALSSCLQFLHAALPVCARCPLINTDTRSGRLSRITANLLLSAVKLFSSLVDSAKTSAKIVSRVTLS |
5 | 3kozA1 | 0.12 | 0.08 | 0.69 | 0.36 | HHpred | | -----------------TREATVTHVLNLLISKLTRADIQS-TITPDPWHIYNIEACDTAKQALIGMDGLMDMQLKEGV-LGDTVRELKERAVLFMEEIIEAGGYFNAVEQG------------FFVD-SGYYPERNGRQINGGI-GAGTVFERDEDYMAPVTAHFGYNNVKQ------------------------------ |
6 | 2pftA | 0.15 | 0.11 | 0.78 | 0.38 | MRFsearch | | ---------HQKKTFDSLIQDALDGLMLEGENIVSAADFSTVLTVFPI-LRHLKQTKPEFDQVLQG----------TAASTKNKLPGLITSAKALEDFADNFQETAGAMLASQRLLSTYICKVLGLLSKSKVYEDPALSAIYNYILKSLEK-----------SELIQLVAVTQKTAERSYREHIEQQIQ-------------- |
7 | 6g70A2 | 0.09 | 0.07 | 0.77 | 0.78 | FFAS-3D | | --------NEARIILRTFEECVAMVRLRRVSLERRHGNMEEAEHLLQDAIKESSFYAIKLARHLFKIQ-------KNLPKSRKVLLEAIEKDKENTKLYLNLLEMEYS--CDLKQNEENILNCFDKAIHGSL----PIKMRITFSQRKV-------EFLEDFGSDVNKLLNAYDEHQTLLKEQDT------------------ |
8 | 6w2vA | 0.14 | 0.12 | 0.87 | 0.71 | SPARKS-K | | ----ATDKEEVIEIVKELAELAKQLVAEVVRALTEVTDTELIREIIKVLLELASKVAELARELAEKTGD----------PIAKECAEAVSAAAEAVKKAADLSEAAQAALELAKAAAEAVLIACLLALDYP--KSDIAKKCIKAASEAAEEASRHPD-----------SQKARDEIKEASQKAEEVKERCERAQEHPNAGWLE |
9 | 1xwmA | 0.14 | 0.11 | 0.75 | 0.63 | CNFpred | | ------TFADDLASLHNKLIEMGRLTEVALQQAIEAFNANLAMAVIDGSIDALEEEVNDFALWLIAAQ----QPVATDLRRIVAAIKIASDIERIADFAVNIAKACIRIGG-VMDIGPLVLMYRLATDM--------VSTAIAAYDRE----------DASLAAQIADMDHRVDEQYGEMMA--------------------- |
10 | 6r3qA | 0.10 | 0.08 | 0.84 | 1.00 | DEthreader | | -G-HMKCL-SQVGSFSMCILSHCIHAIGIHLFIMFASTFSLLDVLLSTTVFLLSFPALAVYSHVTEFE-------TNIHSTMFTGSAVLTAVVQYC-NFC--QL-SS--MR-----SLATVVGAGPLLVILVFFL-LLLLVWFLN-R---------EFEVSYRLHYHGDVEADLHRTKIQSMRDQADWLLRNIIPILYDIWTV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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