Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MGGSGSKSRGFWPFSTSGSGSDSANGGTKQALARIRGARNATPFVFTRRGSMYYDEDGDLAHEFYEEMIVTKNGRKRAKLKRIHKNLIPQGIVKLDHPRIHVDFPVVLCE |
1 | 6w1cE2 | 0.05 | 0.03 | 0.56 | 0.61 | DisCoVER | | -----------APEA------------------LVR----SKREATLSLH-PI------HPTLLSYRTFG-----AERVFDEQ--WITATETIPVPGVEYQWGNPRFVV- |
2 | 1ji6A2 | 0.10 | 0.08 | 0.79 | 0.67 | DEthreader | | ---YDVKNRFTDPIFSGSGYGDKSEPVQ-KL--SF--DGQKVYRT-------I-------ANKVDFSQYDDQKNE-TSTQTYDSKNVSAQDSIPLEYQLYAECPFFTWTH |
3 | 6frwA | 0.05 | 0.05 | 1.00 | 0.64 | CEthreader | | GVSLEGFQHVKSLFSADGKIYQTEEQNAYWSPFIDKNDGKLYMLFEGNVAGSRGTHARYQVGCIGLAVAKDLSGDEWEILPPLITAVGVNDQTERPHFVFQEGKYYLFTI |
4 | 3duzA | 0.07 | 0.05 | 0.75 | 0.73 | EigenThreader | | -------------EHCNAQMKTGPYKIKN------LDITPPKTIVETDYNENVI-----IGYKGYYQAYAYNGGHHTCNKSWRCGISTSKMYSRL---ECQDDTDECQVY |
5 | 6hwhA | 0.23 | 0.16 | 0.72 | 0.37 | HHpred | | ----------------------------TIYLARATGRPGESPFVKMRPEDI---DAGGMETVFPWRESDGMGVRNPVMLIRIKPDMNFGELFAYTKVCSHLGCPSSLYE |
6 | 2pffB | 0.17 | 0.05 | 0.27 | 0.78 | MRFsearch | | ----GVRVIVAGTLDGGGGGGGGGGGGGQGSQEQ---------------------------------------------------------------------------- |
7 | 2rgqB | 0.15 | 0.10 | 0.66 | 0.32 | FFAS-3D | | --------------------FWGIAKGKEELRQGFYALDTFARGKRHCSSNAIIQGNYDEATEFVKDQVRKINGKWYLILRQI--------EVDPSLPLLQ--------- |
8 | 5od4A | 0.12 | 0.12 | 0.95 | 0.77 | SPARKS-K | | RRTSSTSFTTSFSTEPLGYARMLHRDPP----YERAGNSGLNHRIYERSLRTVIDPDGHQAYEIEVRRIPVATPNDCFHTARLSTGSRGPATISWDADA-SYTYYLTISE |
9 | 3u0kA | 0.18 | 0.10 | 0.55 | 0.59 | CNFpred | | -------------------------------------------------TEMMYPADGGLRGYTHMALKVDGGGHLSCSFVTTYRSKKTVGNIKMP-GIHYVSHRLERLE |
10 | 3dmqA4 | 0.08 | 0.06 | 0.85 | 0.83 | DEthreader | | --FAGQIDRRFRYARSEQFR-QFITW-EHPLIRNLDL-ILSDTGSSTILNLPGT------LLVELIYVVEAQQLNLPPTPVRLNNLA---QLNVTGSLVQH-LDALRL-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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