>PF14963 (271 residues) SASQRRAELRRRKLLMNSEQRINRIMGFHRPGSGAEEESQTKSKQQQDSDKLNSLSVPSV SKRVVLGDSVSTGTTDQQGGVAEVKGSPLGDKLDSLIKPPECSNDVNLELRQRNRGDLTS DTAQRGSRHGLEQYLSRFEEAMKLRKQLISEKPNQDDGSTAEEFDSFRIFRLMGCALLAL GVRAFVCKYLSIFAPFLTLQLAYMGLYKYFPKGEKKIKTTVLTAALLLSGIPAEVINRSM DTYSKMGEVFTDLCVYFFTFIFCHELLHYWG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | SASQRRAELRRRKLLMNSEQRINRIMGFHRPGSGAEEESQTKSKQQQDSDKLNSLSVPSVSKRVVLGDSVSTGTTDQQGGVAEVKGSPLGDKLDSLIKPPECSNDVNLELRQRNRGDLTSDTAQRGSRHGLEQYLSRFEEAMKLRKQLISEKPNQDDGSTAEEFDSFRIFRLMGCALLALGVRAFVCKYLSIFAPFLTLQLAYMGLYKYFPKGEKKIKTTVLTAALLLSGIPAEVINRSMDTYSKMGEVFTDLCVYFFTFIFCHELLHYWG | |||||||||||||||||||
1 | 6so5E | 0.97 | 0.37 | 0.38 | 5.61 | HHpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------RIFRLVGCALLALGVRAFVCKYLSIFAPFLTLQLAYMGLYKYFPKSEKKIKTTVLTAALLLSGIPAEVINRSMDTYSKMGEVFTDLCVYFFTFIFCHELLDYW- | |||||||||||||
2 | 6so5E | 0.97 | 0.37 | 0.38 | 1.29 | FFAS-3D | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------RIFRLVGCALLALGVRAFVCKYLSIFAPFLTLQLAYMGLYKYFPKSEKKIKTTVLTAALLLSGIPAEVINRSMDTYSKMGEVFTDLCVYFFTFIFCHELLDYW- | |||||||||||||
3 | 4k5yA | 0.07 | 0.05 | 0.71 | 0.55 | DisCoVER | ---------HYHVAAIINYLGHCISLVALLAFFLRNIIHAN---------LIAAFTAANYFHVTNFFWMFGEGCYLHTAIVLTNIFEMLRIDEGLRLKIYKDT-YYTIGIGLTKSPSAKSELDSNGVITKDEAEKLF-YDRLRAWMFICIGWPFIIWACWATDYIYQGPMALVLVLLPLLGITYMLA-------------------------------------------------------NEVSRVI--YFNAFLESFQGFFVSVFAC- | |||||||||||||
4 | 7a23I | 0.06 | 0.04 | 0.70 | 0.83 | DEthreader | ----------------------------LLLAAGAPLLTIAHWNNFRRFTYQILTCGLCFYVIA--------GLKYLIL--------AFSSGILLFGCIYSTGATHFDQLAK--------ILTGYEIIFMILFIAVGFLFKTPFHMWAPD-IY-EGS--PTPVTAFLSIAPKISIFANILRVFIYGSYGAT--LQQIFFFCSIASMILGALAAMA----GHVGYICIG------------------F-SCGTGIQSLLIGIFIYALMTMAM | |||||||||||||
5 | 3g61A1 | 0.10 | 0.09 | 0.96 | 0.39 | CEthreader | EEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDV-----------SKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQ-LTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFR | |||||||||||||
6 | 3sf4A | 0.08 | 0.08 | 0.99 | 0.52 | EigenThreader | SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHD---YAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGAAERRAYSNLGNAYIFLVEAQSCYSLGNTYTLLQDAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGSGELTARLNLSDLQMVLGLSY | |||||||||||||
7 | 6uz0A | 0.13 | 0.08 | 0.60 | 0.32 | MRFsearch | -TAEFEEMLQVGNLVFFTAEMTFKIIALD-------------------------------------------------------------------------------------------------PYYYFQQGWNIFDSIIVILSLME----------LGSVLRSFRLLRVFKLLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEDFFHAFLIIFRILCGEWIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALL | |||||||||||||
8 | 7c2eR | 0.09 | 0.08 | 0.89 | 0.65 | FFAS-3D | SLWETVQKWREYR-----RQCQRSLTEDPPPATDLF--------CNRTFDEYACWPDGEPGSFVNVSCPWYLPWASSVPQGHVYRFCTAEGLWLQKDNSSLPWRDL-------------SECEEPEEQLLFLYIIYTVGYALSFSALVIA-SAILLGFRHLHCTRNYIHLNLFASFILRALSVFISCRLVFLLMQYCVAALLVEGVYLYLAFSVFSEQWIFRLYVSIGWGVPLLFVVPWGIVKYLRLPILFAIGVNFLIFVRVICIVV--- | |||||||||||||
9 | 3jd8A3 | 0.06 | 0.06 | 0.96 | 0.78 | SPARKS-K | EEGHDYTSSKGQNMVCGGMGCLVQQI---FNAAQLDNYTRIGFAPSSWIDDYFDWVKPQSSCCRVPEGKQRPMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVGTYFMTYHTVLQT-------SADFIDALKKARLIASNVTETMGINGSAYRVVFYVFYEQYDTIFNLGVSLGAIFLVTELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGIAEEALAHMGSSVFSGITLTKFGGIVVLYFRMYLAMVLLGA | |||||||||||||
10 | 5oqtA | 0.08 | 0.04 | 0.47 | 0.69 | CNFpred | ----------------------------------------------------------------------------------------------------------------------------LFRKKPIQLLMKESGAKGASLRKELGA-----------DLTMLGIGAIIGTGIFVLTGVAAAEHAPALVLSFILSGLACVFAALCY---------AEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |