Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LLKNAISLPAIGGPRLVALPAAGAPPKPPRLHLGDQEGEPPANETPSGQTDKRQDGPDSGLRARQSEAEGHSRDEQATNSLAPSKGDFVVTDVPESNLLSNAVSLLSLHLDLGPSILDDVLQIMDK |
1 | 2q6bA | 0.05 | 0.04 | 0.79 | 0.83 | DEthreader | | LDKEF-Q--VPM--A----------------ASSRVLADGMTRCDKKPA----NWGKSVVC-IGGYNAHAANIVTAIYICQDAA-QNVGSSIEIGGGTNLQQLQVQGACKNENARQLARIVCGTVM |
2 | 6vlkA1 | 0.09 | 0.08 | 0.93 | 0.44 | CEthreader | | DVIVSTAGAGSSGTQITNRYADRVPI---------PVSEITDTIDKFGKCSSKATYVRNNHKVEAFNEDKNPQDMPLIASKYNSVGSKAWHTTNDTYMVAGTPGTYRTGTSVNCIIEEVEARSIFP |
3 | 5xg2A | 0.02 | 0.02 | 1.00 | 0.60 | EigenThreader | | FDTVVKELEEARKSLYEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKALVEGKLE |
4 | 2dbhA | 0.31 | 0.09 | 0.28 | 0.24 | HHpred | | ------------------------------------------------------------------------------------------SGSSGSSALSRNGSFITDPCDLQP-IFDDMLHFLNP |
5 | 2pffB | 0.12 | 0.08 | 0.64 | 0.63 | MRFsearch | | ---------------------------DDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------DLYKTSKAAQDVWNRADN |
6 | 2xd8A | 0.12 | 0.12 | 0.97 | 0.32 | FFAS-3D | | -MANA-NQVALGRSNLSTGTGYGGATDKYALYLKLFSGEMFKGFQHETIARDLVTKRTLKNGKSLQFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDDLLSSAFVYLAEKYDRLIFRSI-- |
7 | 6tlxA | 0.07 | 0.05 | 0.71 | 0.92 | SPARKS-K | | ----------------------------DRIKCPKKHGMKLLRAFPKLNDTAGGTSDYGWGF--WCDRCHKEVPA------LIKSKKRISKAQDERTHAPEENTFFHCGYDLCKACGASIIHASNT |
8 | 3a6pA | 0.21 | 0.06 | 0.27 | 0.37 | CNFpred | | -------------------------------------------------------------------------------------------EIPVNDGIELLQMVLNFDT-KDPLILSCVLTNVSA |
9 | 2zuoM | 0.03 | 0.02 | 0.88 | 0.83 | DEthreader | | ---EGKGRV--LQNFRTGEEWNPERLERGQ-EVVEE-DVKGKV------YK-A-PAEAAKLFSVFDACIAVVDVQSVEPVRDALQRSVQLAITTSQEAAAKHEAQRLEQEARGRLERQKILDQSEE |
10 | 6d4hA | 0.10 | 0.10 | 1.00 | 0.69 | MUSTER | | LYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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