Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | SLNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRNQMAMDWVNREQNSPGALSRELASTERELDEARLAGKELRFHKEKKDILMLAAGQ |
1 | 5cwfA | 0.14 | 0.09 | 0.69 | 0.64 | DisCoVER | | -MMVMEAL-----------------KKAVELAKKNNDDEVAREIERA-AKEIVALRENNSDEMAVMLALAKAVLLAAKNNDDEV-ARE--I-ARA-AAE-IVEALRENNDEMAKVMLALAKAVLLAAKNNDDEVAREIARA-AAEIVEALRENNSDEMAMLELAKRVLDAANDETAREIARQAAEEV--------------------------------------------- |
2 | 3pjzA | 0.08 | 0.06 | 0.80 | 0.83 | DEthreader | | ---------------V--LLLFTMFTLGSGS-FLISVTAFFESATVLDKLFYRQFLQWTIAVIHSFSTIAIGGFS--DASMGYDYINLITVVFLLISACNF-TLHYYWKDPFRAFIFIQVLLFLVCFPAFDQALFQTVSISTTSGGGGGMKVIRILLLTL-G------------------------GFFSAYALVFVVCMLGLIMDELSSGEVALHFGAKWVLIVSMLFITL |
3 | 2yt4A | 0.12 | 0.09 | 0.77 | 0.46 | CEthreader | | GKSEVCILHEYMQRV------LKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTAS--SKKLAKNKAARATLEILI--------------PDFVKQSEELEYFNHISIEDSRVYELTSKAG--------------------LLSPYQILHECLKRNHGMGDTS------IKFEQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRE----- |
4 | 1sxjC | 0.10 | 0.09 | 0.86 | 0.63 | EigenThreader | | GTGKTSTIVALAREIYGKNQIFSKGFKLIILDEADTKNTRFCVLANYAHKLLLSQCQPLP-------QEAIERRIANVLVHEKLKLSPNAEKALIELSN--------------GDMRRVLNVLQSCKEISDDVIYECCGAPRPSDLKAVLKSILEDDTAHYTLNKVRSAKGLALIDLIEGIVKILEETRV---HLLTKLADIEYSIS--------KGGNDQIQGSAVIGAIK |
5 | 1qu6A | 0.12 | 0.09 | 0.69 | 0.65 | HHpred | | AGFFMEELNTYRQKQGVV---------LKYQELPNSGPPFTFQVIID-GREFP-EGEGRSKKEAKNAAAKLAVE-ILNKEKKAVSPLL------------LT-TTNS--SEGLSMG---------------NYIGLINRIAQKKRLTVNYEQCASGV-HGPEG--FHYKCKMGQKE--------Y-SIGTGSTKQEAKQLAAKLAYLQILSEET------------------ |
6 | 6gmhQ | 0.15 | 0.12 | 0.82 | 0.48 | MRFsearch | | --YSMLALGNVWLQTLHQPT-------------------------------------RDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVFREARDVFAQVREATAQYISAVQMYENCLRKFYNTEVVLYLVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKEL--ELAHRYFSYLSKLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQ |
7 | 1y7911 | 0.17 | 0.10 | 0.62 | 0.77 | FFAS-3D | | --------------------------------------------------------------------------NPFLVQSHFDQIANHHYRPAFDEGMQQKRAEIAALNPQMPDFNNTILALEQ-SGELLTRVTSVFFAMTAAHTNDELQRLDEQ--FSAELAELANDIYLNGELFA--RVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKL--AQADKAKL------ |
8 | 5cwjA | 0.14 | 0.10 | 0.69 | 0.62 | SPARKS-K | | SEEEQERIRRILKEARKSG----------------------------------------TEESLRQAIEDVAQLAKKSQD-------SEVLEEAIRVILRIAKESG-SEEALRQAIRAVAEIAKEAQD-SEVLEEAIRVILRIAKESGS----EEALRQAIRAVAEIAKEAQDPRVLEEAIRVIRQIAEESGS--EEARRQAERAEEEIRRRAQ------------------ |
9 | 1bk6A | 0.12 | 0.08 | 0.71 | 0.63 | CNFpred | | --------------------------------------------------------------EAIQAVIDVRIPKRLVELL--SHESTLVQTPALRAVGNIVTGNDLQTQVNAGVLPALRLLLSSP--KENIKKEACWTISNITANTEQIQAVIDAN-LIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSCIKPLCDLLEI-ADNRIIEVTLDALENIIKM |
10 | 4ui9A | 0.09 | 0.07 | 0.80 | 0.83 | DEthreader | | --D-D-GMNDMNHEVMSLIW-LRV-DVRLQSAHP-----CTMLPVGRGMFTPKLNLN-PPNMTSWASFHNGVAAGLKI--APASQIDSAWIVYNKPKHAELAN----DYLTKGHEMTSIGLLLGVS-----AAK-LG------------H--A--ELDVPHVQVAAVVGIGLVQLAAGLAGCPGTKEFLLQAHVYIIAGACLSLGFASENLSVMSLSTSNIA-LL---Y--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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