>PF14941 (243 residues) SELKVRVRLADGQITEEVLEADSEKDSITLEFKQGDGALITFVADFKQDVKVFRALILGE LERGQSQYQALCFISRLNHNEIIPSESMARLRQKNPHAIRSAEERRGLDQLTMNVAVNLS RSWQLSSHIHNMCSEAQEAIYTRETDVKHWLERGVEGSMFEILPQAVDVVPPLLPCRSTK ALWQPCLCSYSLRLEWYPCLLKYCRNRDTTGKGSPYKCGIKSCSKGYHFTYYVPQKQLCL WDE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | SELKVRVRLADGQITEEVLEADSEKDSITLEFKQGDGALITFVADFKQDVKVFRALILGELERGQSQYQALCFISRLNHNEIIPSESMARLRQKNPHAIRSAEERRGLDQLTMNVAVNLSRSWQLSSHIHNMCSEAQEAIYTRETDVKHWLERGVEGSMFEILPQAVDVVPPLLPCRSTKALWQPCLCSYSLRLEWYPCLLKYCRNRDTTGKGSPYKCGIKSCSKGYHFTYYVPQKQLCLWDE | |||||||||||||||||||
1 | 6cd2B1 | 0.07 | 0.04 | 0.62 | 0.67 | DisCoVER | --WNNI---------------------------------------VFYSLG-DVNSYQGGN-VVIPQFITSWRPGIATVTWNQ------CNGPEFADAYY-RE---YIAWVVFPKKVMTQNGYPLF--IEVHNK-GSWLKCQKPGEI---------------TRLTEKFDDIIFKVALLPLGDYSVKIPYTSGMQRHFA-SY---------------LGARFAKLPRENEMLFLFKNI----- | |||||||||||||
2 | 4issA1 | 0.06 | 0.04 | 0.63 | 0.67 | DEthreader | ---GWSVWLSFHSLLLLLQKPAPE-PWISLILQWLQKGPIAVDTACPSYLYSVVELLRDAG------A----TNLFATRSPYGKTPCVDSSVGRG--I------------VPLSLGTDTAGGRGLKPTKGAFSCR--GVV-------------------------------PACKSLD--DLLEDS-EF---------N----V-LAKIVIDVLCVPTAVPAKRELDGPS-D---T------- | |||||||||||||
3 | 3c5mB | 0.10 | 0.09 | 0.89 | 0.62 | CEthreader | KGYGTWVANSDCTKLVGIEILYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDS---------TVGFCHEGPHDLVDARWLVNEDGSNVRKIKEHAEGESCTHEFWIAAYVSYFKGQTDRVIYKANPETLENEEVVPPCSHLSNFDGSLVGDGCDAPVNIENDPFLYVLNTKAKSAQGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK------------------ | |||||||||||||
4 | 6j0tA | 0.07 | 0.06 | 0.83 | 0.60 | EigenThreader | GAFSGSMIDPRQRAVAVWTLSKG-PSQAQHISYSLDGGWIMAVAESQQYECPGLVKVPYD--SVPDSAWVLFVSINPGGPLGGSD-------QTRFLDMGKD----YYALQTFGIAWAS----NWQY-----------AQQAPT---------DPWRSSMSTVTSENGDNPSGGSPDIKSNVFADLSLYFKGNFFLDRGQLAVTNPVSNYTTNVNGNVFFSTNNVIGEIDIKSPY----DKAY | |||||||||||||
5 | 3nx1A | 0.11 | 0.05 | 0.46 | 0.32 | HHpred | -NYEIYVKNVGNRVDQEAYIVRVGESIYKISWTEPTGTDVSLIVNLGDSLFH--GTIFFPRWVMNNPEPTVCF-----QNDHI--PLMNSYREAGPAYPTEVIDEFATITFVRDCGANNESV------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5halA | 0.10 | 0.03 | 0.29 | 0.35 | MRFsearch | --MRYAITDGGATGEVEYTWQPVAADTYAIAWQEADRATVVHIDDFAA-GTSRTFFTAA---------------------------------------------SLDFHRLDGSLRAV----------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6fszGG | 0.11 | 0.07 | 0.62 | 0.40 | FFAS-3D | GVQTAYIDYSSNDFVIGVIIG-TFSDSYKVSLQNFSSSVSLSYMAFPNASKLVYARVCTAEKELEAEIECFDSFGILEDGMIVNLNFARQLLFNNDFPLLKVLAAHTKFEVAIGIWVELSNTLACYRTIMECCQKNDTA--AFKDIAKRQFKE------------------------------------------------------------------------------------------ | |||||||||||||
8 | 2q5tA1 | 0.10 | 0.08 | 0.81 | 0.72 | SPARKS-K | LYYSMTINDEQKGESIITIRATRHYGVIHLDITTENGTKTYSYNRKEGEFAINWLVPIGEDSPA----SIKISVDELDQQRNIIEQTLEQWKTQ--GNVSFSVTRPEHNIAISWPSVSYKAA-QKEGSRHKRWAHWHTG-----LALCWLMDAIYNYETVAGTPKVITVKQGIEQ--------KPVEQRIHDI------LSLFCPDADKSCVASNNDQANINIE------------------- | |||||||||||||
9 | 4ufcA | 0.14 | 0.08 | 0.58 | 0.82 | CNFpred | ATTTTRYQVDDVTYTRTTFASF-TDNVIIMHIKA-NALNFTIAYNCPLVHKVLTVTCQGKEQEGLKAALRAECQIQVKTNGTLR---------PAGNTLQINEG--TEATLYISAATNYVVSADESHRTSEYLKRAMQIPYELKNHIAYYKKQ------------------------------------------------------------------------------------------ | |||||||||||||
10 | 5b62A | 0.07 | 0.05 | 0.72 | 0.67 | DEthreader | VTGSFLAIS-F-CYTIIGYEEDEQKLYNSALVVNPQGQIFNYRKTLEENPGFQTFPMDFSCAKNRDVTLKASIGDLSYKFAWLN-SITAKKIAFALEQGLSQQMDEPDMVWIRFFPSILKTRMLHYY----------D-T-LEKTFLGTSL-------------------------------FQGKNAILVLANRCGTE-DG-----------------I-FAGSSGIYKFNGK----FEVFR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |