Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLGNEIKFAVREPLGLRVWQLVSAVMFSGVAIMALAFPDQLYDTVFDEESASSKTPIRLYGGALLSIALIMWNALYTAEKVIIRWTLLTEACYFTVQFLVTTVSLVESSRIATGAVLLLVSRALFILISIYYYYQVGRRPKK |
1 | 6r9tA | 0.07 | 0.07 | 0.91 | 1.00 | DEthreader | | GCVTTISSNLTEMSRGKLLAALL-------GRPLLQ---SLLQGESDTDPH-FQDALMQLAKAVASAAAAL---VL-KAKSVAQRTQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLVEAGRLVAKAVEGCVSASQ-AATDLLRGVGAAATAVTQALNELLQHVKAHASDAK |
2 | 6an7D | 0.05 | 0.04 | 0.76 | 0.65 | DisCoVER | | AFLWPILLV--------------LIYTLIFSHLIGTVYAYS---IYLSS-----GIFPWFFFSNSLSRITGIFT-EKKF------LFTKIPIRLEVFPVVVIISELINYLIGISLVTLISFITMIVYSFSIGMVLGTLNV-------------FRDIKEIILNPMYPVVSIHHLFVNY- |
3 | 5vjsA | 0.04 | 0.03 | 0.74 | 1.00 | DEthreader | | -----------------------------------------HQ--AQEFQQLLQEIQQLG-RELLKGELQGIKQLREASEK-ARNPKSVQKILED-EEKHIELLETLQQTGQEQLKIQQLLQKHQQLGAKILEDEEKHIELLETILGGLRELLKGELQGIKQYRELQQLGQKAQQLKLT |
4 | 1ocrN | 0.07 | 0.07 | 1.00 | 0.46 | CEthreader | | NRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVASVDLTIFSLHLAGVSSILGAINFITTIINMKPFVWSVMITAVLLLLSLPVLAAGITMLLTDRNL |
5 | 5v6pA | 0.05 | 0.05 | 0.98 | 0.78 | EigenThreader | | LAIFVVVTYLLTFYCVYSATKTSVSFLQVTLKLNEGMSSLFHERYFFTVAFFGLLLLYRFSFNLVLLAVVDYQIITRCISSIYTNQKSDQVMEFTMLLIDLLNLFLQTCLNFWEFYRSQQSYEKAIDVFTRFLKTALHLSML--IPFRMPMMLLKDVVWDILALYQSGTSLWKIWRNN- |
6 | 6wvgA | 0.12 | 0.10 | 0.86 | 0.35 | HHpred | | --------------RIELKGID-FKEDGN--------ILGHKLEMGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIHNNGVLFHLGNVFV-IVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLFVYEQKIGIITICVCVIEVLGMSFALTLNSQIDKTSN- |
7 | 3vvnA1 | 0.13 | 0.11 | 0.80 | 0.25 | MRFsearch | | -----------------------------GTSSAIARRIGARDK--EGADNVAVHSLILSLILGVTITITMLPAIDSLFRSMGAEAVELAIEYARVLLAGAFIIVFNNVGNGILRGEGDANRAMLAMVLGSGLNIVLDPIFIYTLGFGVVGAAYATLLSMVVTSLFIAYWLFVKR---- |
8 | 4or2A | 0.11 | 0.11 | 0.98 | 0.68 | FFAS-3D | | -KADNAAQVKDALTKMRAAALDAQKEDKSPDSPEMKDFVGQIRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVV--KSSSRELCYIILAGIFLGYVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPM- |
9 | 6w2wA | 0.14 | 0.14 | 1.00 | 0.82 | SPARKS-K | | EKAKEATDKEEVIEIVKELALAKQSTDPNVVAYQLAEVAEHSDPELIKEIEALRLAEEQELAEAARLALKAARLLEEARQLLSKDPENEAKECLKAVRAALEAALLALLLLAKHPSQAAQDAVQLATAALRAVEAACQLAKQYPNSDIAKKCIKAASEAAEEASKAAEEAQRHPDSQKA |
10 | 3rkoB | 0.13 | 0.10 | 0.77 | 0.99 | CNFpred | | ---------GAVGKSAQL------------LQTWLADAMAG----------PTPVSALIHAATMVTAGVYLIARTHGLFLMT-------PEVLHLVGIVGAVTLLLAGFAALVQT--DIKRVLAYSTMSQIGYMFLALGVQAWDA--AIFHLMTHAFFKALLFLASGSVILACHHEQNI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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