>PF14925 (639 residues) CSNAVGVRSISPQNPEVTELDIETNTFCPPPLYYTHPTLEKTPPVQGKITIKPQMNVPEE LDGTFPEEKLVNPPTHTDTLKHRNSATLESPPMLINLPHAQEVGASNQATDHPQTEENRI NTIRQLPLLNALLIELSLLYNQPVASPTHIHPHLAWLYRTEVKSPESSAISTCKSESKKD KLSMGENEKSVSLQYKKNQVENLKKGKYFDKNSGTPPKRVPRGKLLYGLTNTLKLRLKQT NPDMLVVHEKREKYRKMQAQMLGAKLRIPSSKVKVLSFAEQREKPHQLPKDKCLALDASF AENSDTSKQISGVFDNPSTTKEIKLKCTTEKTVDCGENTANNGSLEEILSSANFIVPERF THTNILGGKVEMKVPSPCFFRQVAVVDRIVVDKEIADKQVKTTNNDILTVDMSENKPSKN SCSESISELKYSDDFTSPCYSDDFCATEDTSRISQAHDSSLGAENPKHSQYTSKSSETRL SIRKNNSEKSSILSPPFSAGSPVHSYKRSHISKTQDKSLEEASNISTSDLSSSHWTEEKE NQIDQNSMHNSKVIKRGQDISVKLKTRTGCNSLEKSQSPRTSQVSSYLPSNLSELELNVL ERSTSDHLEEDSDEVCSLNISKQCKDICELVINKLPGYT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | CSNAVGVRSISPQNPEVTELDIETNTFCPPPLYYTHPTLEKTPPVQGKITIKPQMNVPEELDGTFPEEKLVNPPTHTDTLKHRNSATLESPPMLINLPHAQEVGASNQATDHPQTEENRINTIRQLPLLNALLIELSLLYNQPVASPTHIHPHLAWLYRTEVKSPESSAISTCKSESKKDKLSMGENEKSVSLQYKKNQVENLKKGKYFDKNSGTPPKRVPRGKLLYGLTNTLKLRLKQTNPDMLVVHEKREKYRKMQAQMLGAKLRIPSSKVKVLSFAEQREKPHQLPKDKCLALDASFAENSDTSKQISGVFDNPSTTKEIKLKCTTEKTVDCGENTANNGSLEEILSSANFIVPERFTHTNILGGKVEMKVPSPCFFRQVAVVDRIVVDKEIADKQVKTTNNDILTVDMSENKPSKNSCSESISELKYSDDFTSPCYSDDFCATEDTSRISQAHDSSLGAENPKHSQYTSKSSETRLSIRKNNSEKSSILSPPFSAGSPVHSYKRSHISKTQDKSLEEASNISTSDLSSSHWTEEKENQIDQNSMHNSKVIKRGQDISVKLKTRTGCNSLEKSQSPRTSQVSSYLPSNLSELELNVLERSTSDHLEEDSDEVCSLNISKQCKDICELVINKLPGYT | |||||||||||||||||||
1 | 5jcss | 0.09 | 0.08 | 0.91 | 2.14 | SPARKS-K | STVRINEDHQKDSSNKIYNLNMIGM-----RIWNVIELEEPSEEDLTHILAQKFPILTNLIPDSYKNVKSIYMNTKFISLNKGAHTRVVSVRDLIERLDILFKNNGINKPDQLIQSSVYDSIFSEAADC----------FAGAIGEFKAL----EPIIQAIGESLDIASSRISLFLTQHVP-TLENLDDSIKIG-RAVLLKEKLNIQKKSMNSTLFAFTNHSLRLLVGETTTVVQQLQQTTVAVPIQENFETLFNA----------TFSLKKNEKFHKMLHRCFNKNQW----KNVVKLWNEAYKMAQSILKITNTENENEN---AKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVERAGEWLLLDEVNLATADTLESISDLLTEPDSRSILLSEKGDAEPIKAHPDFRIFACMNPATDFTEIYVHSP---ERDITDLLSIIDKYIGKYSVSDEWVGNDIAELYLEAKKLSDNNTIVDGSNQKPHFSIRTLTRTLLYVTDIIHIYGLRRSLYDGFCMSFLTLLDQKSEAILKPVIEKFTLGRLKNVKSIMSYIITPFVEK---------------NMMNLVRATSGKRFPYLADITGHKFVRINNHEHTDLQEYLGTYVTDDTG | |||||||||||||
2 | 1zlgA | 0.09 | 0.09 | 0.94 | 1.25 | MUSTER | AAAARRLDESLSAGSVQRASRCLSLQITRISAFFQHFQNNGSLQNHKQCSLEPCKESGDLRKHQCQSFEPLFPKKSYECLTSCEFLKYILLVKQGDCPAPEKASGFAAACVESCEVDNECSGVK--------------KCCSNGCGHTCQVPKT--LYKGVPLKPRKELRFTELQSSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVA---VNVH------TRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVT-DLPEEPDIPVHHWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQKKTEDPTVNR-RWFPEACAHNRTTGSEASSGMTHENYIILQDLSFIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENSASFIVQDVNITGHKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLQVLTPGGEGPATIKTFRTPELPPSS--AHRSHLKHRHPHHYKPSPERYGK-PIPNP-----------LLGLD | |||||||||||||
3 | 6chgD | 0.07 | 0.04 | 0.53 | 0.67 | DisCoVER | --------ANLLLQDPFGVLKEYPEKLTHTLEVVAAV--------------------CVKFS-PRGDYLAVGCSNGAIIIYDM--DS-LKPIAMLGTHSGAHTRSVQS----VC----W-----------------------------SNDG-----------------------------------------------------------------------------------------RY-LW---S-------------------SG-RDWYAKLWDMTQPTKC---FQQYKFPLWSCHVVRWNVCIVTVVEEPTAYVLTLTRQNAFHCFPLLEQDQDISGHGYTLVACPHESIIITGTSKG---WINAFQLDLEDKIRCCYEEKIA---NANIKQIIISGTRIAINGSDRTIRQYQLEHKYQDNRLQWN--TIFFSNHSGEYLVASAHGSSAHDL-YLWE--TSSGSLVRV--------------LEGADEELLDIDWN--------FYS--------MRIASNGF--------------------------------------------ESG--WVYMWSIV--EEIAIDLCTPEKYDV-------GND----IS-------------MPSF- | |||||||||||||
4 | 1kqgA | 0.05 | 0.03 | 0.54 | 0.67 | DEthreader | FITGMLCASGASTMLTQKAVDNQARVHGPTVASLA-----TFGRGAMTNHWDIKNANV-VMV--MGGNAAEAHPVGFR---WAMEA-------------NDATLIVADIYAFLVLLIKINYVKYTNAW--L-------YALGW-TQHTVGAQNIRTMAMIQ---------NMGMA-GGGVNALR-GHSNIQ---G--------------LTDLG----------TSLPGYLT-NT--------V-Y-WSNYPKFFVSLMKSGDQK--NKENNGYAQLLSSFAHLRDTSCWIYTGSWQMAN--------------WPLNRRVLYNRASAWRMLIQWGSKWTGNDIP-DFG-------------N-AAPGTPTGPF-I-M---QPEGM-----------------------------------------------GRLFA---------------------------------------------------INKMAE----------G--PFPEHYE--NPLHPNVVSNPVVRLYEQ--DALRMGKKEQFPYVGTTYRHVELPLNVN---------------------------------------NTLTPNVGDANSQTP-------------------- | |||||||||||||
5 | 6i96A | 0.07 | 0.06 | 0.91 | 0.66 | CEthreader | --------------------------------------------------------VFALGNNLGSTDGYLATHSQIATKTSKPLLETSQTVSVITREQIDDTASKTVQQAMRYTPGIFTGQVGASNRYDYVVMRGFADNSVDNIYKAMGDSGTFSSMQVDPYFLERIDVLKGPSSVLYGRSLPGGTSKKPLYEDYRQITGSIGNMGQKEMGFDFSGPLDEEKRIAYRLIGLGKGSDTQFDHVKEERYAIAPTLAIDFSDDTTLTLQGYLQHDPNGGYHGGVPADFDGEPSKDDFDRTQRMFGYQLEHRIDDVWSARQNFRYLDSDVDLSQVYAYGWSASEPNKLNRYFSGARIVDNMLQAEFATGAARHTLLTGLDYQRRRTVVDWRSGSASALDAFNPVYGDDAISYFPDDNHTRRLEQTGVYLQDLIDIDQWRFSLDWVSVTDKNRSTGSKADDDWEKFTGRIGALYLFDNGLAPYVSYSESFNPNAYSDAPLAPTEGKQWELGLKFQAPGSNSFYTASLFHITQENVASKEPQDNFYTSVGEVRSQGLELEAHTQLSDNLKLLGSYTYTDITYTKSLDGNQGHTPNQAPKHMASLWADYAFDAGPLSGLSIGGGARYVGETWADKENTLRVPDYT | |||||||||||||
6 | 5l4kN | 0.06 | 0.06 | 0.93 | 0.87 | EigenThreader | -----------MITSAAGIIS------LLDEDEPQLKEFALHKLNAVVN----DFWAEISESVDKIEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL----PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQYMNLEKPDFINVCQCLIFLDLMAYQICFDLYESAQFLSSVIQNLRTVGTIKILSGEMAIELHLQFLIRNNNTDLMILKNTKRNSVCHTATVIANSFMHCGTNWAKFTATASLGVIHKTSPGSAYQEGGGLYALGLIHANHGGLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNLLHVAVSDVNDDVRRAAVESLGFILFRTPEQ-----CPSVVSLLSESYNPHVRYGAAMALGICC----------AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKQLYSKVINDKHDD---VMAKFGAILAQGILDA | |||||||||||||
7 | 2pffB | 0.21 | 0.05 | 0.23 | 0.52 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAQDVWNRADNHFKDTYGFILDIVINNPVNLTIHFIRENYSAMIFETIVGKL----KTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGL-IP-ADAT---F-------AGHSLGEYAALA--SLAD-----VMSIESLVEVVFYRGMTMQVAVP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 5svaU | 0.20 | 0.04 | 0.19 | 0.63 | MRFsearch | --------------------------YPPPPPYVKFYLIPPPMPKNQQYRAF------------------------GSIWEST-------------------------------NYQYKIQELRKLSLLLNYLELIGVLSIN--------------------------------------------------PDMYERKVENIR-------------------TILVNIHHLLEYRPHQSRESLIMLLEEQLEYKRGEIREIE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVCKQVHDKLT--- | |||||||||||||
9 | 3cnfB | 0.11 | 0.10 | 0.95 | 0.77 | FFAS-3D | --HGPNQGALRPELAFDHDHIIRCLMLAYPRLETGYVASANVIRPVSEKRYFPENLEQNQSAARLVSA-VKARASEADISSIHLAIAREVSPMFNVHKIAESFEDPSSIVVVPTEFNRIKGDIQNLLFFSRWYVEYGIFVQRGAT------------YTINAAGEFEFSGRNEKWDQALYLFSDVPLAGANTIIAIMRLFTPQGFLRTDDLAIAANFPRASRNPQTYTVTNEFASRFRTTLANVVNERAVQDDMQKATRSCTKQWLRHLETQFDNIAVAHTDHLSVVYAT--MSNFMLNFTNNFATHV-AVVLYQSGVINGPASTYLRENEVLVVMPDYYDVVSRFANANLQMNNNRYHESVLEIADIFDQADFAVRQLRALMPTLSTSQIRHAIERIAQITDVDSTLTRSLKMQNAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELQLRLTDDDPDPVPEGYVAVQYAHRLFSSSLANKRNRVPPTGMAYPSPTGRPHVHTINERAGMSKLVAD-----NIIASVIKSNWVVDILDIEYTAEVMTPSEGYTQHVDAESIMTAPKGKGLLRPEASGEDMRLIYPLQPISVARSMRAIVNHNEVDRPREMDT-GTLSRNGDYSP----VAN---G-- | |||||||||||||
10 | 6em5m | 0.12 | 0.10 | 0.84 | 1.86 | SPARKS-K | KYADGSDRIIKPEINPVYDSD---------------DSDAETQNTIGNIPLSAYDEMPSALDQLLDSIELPEDKNSGSSLNLTEQTDDSINPYEPLIDWFTRHEEVMPLTAVPEPKRRKNEAKRVMKIVRAIREKLKEMKEKEKIENYQ--------YDLWGDSTETNDHVMHLRAPKLPPPTNEESYN-PPEEYLLSPEEKEAWENTEY--SERERNFIPQK---YS-------ALRKVESIRERFERSLDLYL-------------APRVRKNKLNIDPNSLIPELPSPKDLRPFPIRCSTIKGKVRTLSIDPSATGSDDGTVRVWEILTGREVYRTTLIDDEENPDYHIECIEWNPDANNGILAVAVGENIHLIVPPIFGYDIENNGKTKIEDGFAQWNKPSQKQLEKDICITISCKKTVKK----------LSWHRKGDYVQPDSGNTSVLIHQVSKHLTQSPFKKSKGIIMDAKFHPFKPVCSQRYVRIYDLSQQILVKKLLPSKIDIHPRGSFDKRVLWHDLDLASTPYKTLRYHKKLPHATVYDDMMKNPMIVPTGHKVINSLGVLDAIWHPREAWLFSAGADNTARLWTT----------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |