>PF14923 (464 residues) LLWEEFGSALFNILYHPSCNGIFGSLNQCKEQMVFLAVKELHGGCRKALIPGECEGVIND LCMQVISKAAFVHWDQVMCKALGSGQKDKCLPDPNNEGSIVRTTTTTWLLQQLFHPLHTV LGSLKDGGNWQKGNLCSSELTLLSCTVATVHSSSYWAMTKAYQFLSSWSLNQFLLVTQGD LKVLKAEIEKIVPLVEALNLDNKCTPGLTGKLLLQQEKTLLAQLTEGAANIQAFSENVLK IFSTDCKKMAVEIFKQTMPGGKHWRVNCRAELPGSPSEYAASAAHSVLGQVLEGVQPLPD EARALALTEATTAFMEAWMEHILKQKIKFSVQGALQLKQDFDTIRELLKSEEYSLSEEIR QRLLSLGVFHQVDNAIICLLQQPASKAYVPSRTWEPFRRCCSNPSRTRDFNTGSLNSLES MDVQVARNNAIVQAESSLAPELLGKIKSNAIQESYLAGKQQDWL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LLWEEFGSALFNILYHPSCNGIFGSLNQCKEQMVFLAVKELHGGCRKALIPGECEGVINDLCMQVISKAAFVHWDQVMCKALGSGQKDKCLPDPNNEGSIVRTTTTTWLLQQLFHPLHTVLGSLKDGGNWQKGNLCSSELTLLSCTVATVHSSSYWAMTKAYQFLSSWSLNQFLLVTQGDLKVLKAEIEKIVPLVEALNLDNKCTPGLTGKLLLQQEKTLLAQLTEGAANIQAFSENVLKIFSTDCKKMAVEIFKQTMPGGKHWRVNCRAELPGSPSEYAASAAHSVLGQVLEGVQPLPDEARALALTEATTAFMEAWMEHILKQKIKFSVQGALQLKQDFDTIRELLKSEEYSLSEEIRQRLLSLGVFHQVDNAIICLLQQPASKAYVPSRTWEPFRRCCSNPSRTRDFNTGSLNSLESMDVQVARNNAIVQAESSLAPELLGKIKSNAIQESYLAGKQQDWL | |||||||||||||||||||
1 | 5yfpE | 0.07 | 0.06 | 0.82 | 1.03 | DisCoVER | IQIQRVFAQKI-EPRFEVLLRNSLSISNLAYVRILHGFTLFGKFTLISNLSTTLEQCFADLFKRSLEAILVDMTSKFTVNYDINLLDTASDIDN------SPNSPAN-YSLNDVDSMLKCVVESTRVMELIAHYILEILKIMFLGIVSYMEIALEVAYWKICKVDINKTAGVVNLNF-LKFISMSTEILDLL--SISIKFLPLLNSPEIKAQIIEMTNSQIQKMEIL---INIILQETITVISTKFSAILC-KQKKKDFVPKSQE-----LLDQDTL-PA----IEIVNILNLIFESKLQTFLTLIGEELYGLLLSHYS-HFQ-VNSIGGVVVTKDIIGYQ--TA--I-----EDW--G--VA--S-LIDKFATLRELANLFTVQPELL-----ESLTKEGHLA-DIGR---DIIQSYISN------------REDFNHDNF---------INSV--------- | |||||||||||||
2 | 4y21A | 0.08 | 0.06 | 0.75 | 1.38 | EigenThreader | SLFAQDMKYAMEEHDKHR---------LCKSADYMNLHFKVKWLYNEYVAELPTFKDYPAWFEPFVIQWLDENEEVSRDFLHERDKKDGFQQTSE---HALFSCSVVDVFSQLNQSFEIIKKL----ECPDPQIVGHYMRRFAKTISNVLLQYADIVSKDFASYC-SKEKEKVPCILMNNTQQLRVQLEKMFEAM----GGKELD------------AEASGTLKELQVKLNNVLDELSHVFATSHIEECVRQMGDILSQVKGTGNVPASACSSDADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTI---VLSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKS---PDLQSLRYALSLYTQATDLLIK---------------------------------------------------------------------------- | |||||||||||||
3 | 5h11A | 0.12 | 0.09 | 0.82 | 1.19 | FFAS-3D | ---NKIQAHVKERLDETRNSDVEQYLKN--LYDLYTRTTALAAKLTDYNLGSDKHTFLSKLIKNIYIDMERQYLQNRSGMILQRDSKNHQKRIDTHGETLLSQEVVVNLLQETRHAFERCNKLSDPAD-------LPKNAFSIFLILVE-YLCVDHIDYALEIGLSAIPSAYFLDVVQQANTIFHLFDKQFNDHLMPLISSSPK-----LTECLHKKKEVIEQMEVKLDTIDRTLNCMIGQMKYILTTEQKK---------TDFKPEDENNVMIQYTTACSKVCAYVGKQVERVRRSMDGKNVDTVLTELGVRFHRLIHEHL--QQFSYSSMGGMLAICDVAEYRRSAKDFRV---PLVLQL------FDTLHALCNLLVVAPDNKQVCSGEQLTNLDRNLLHAQLRVDYRSARLGRH---------------------------------------------- | |||||||||||||
4 | 5uf7A | 0.11 | 0.08 | 0.73 | 1.10 | CNFpred | VMWSLFAQDMKYAMEEHDKHRLCKSAD--YMNLHFKVKWLYNEYVAEL--VPEYPAWFEPFVIQW-LDENEEVSRDFLHGALERDKKDGFQQTSE----HALFSCSVVDVFSQLNQSFEIIKKLEC-------PDPQIVGHYMRRFAKTISNVLLQYADIVSKDFASYC-EKVPCILMNNTQQLRVQLEKMFEAMGGK----------------ELDAEASGTLKELQVKLNNVLDELSHVFATSFQPHIEECVRQMGD--ILSQVKGTGNVPASACSSVAQDADNVLQPIMDLLD-CEKTVLKRVLKELWKLVMNTMERTIVL-AKSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEK---SPDLQSLRYALSLYTQ----------------------------------------------------------------------------------- | |||||||||||||
5 | 1jqnA | 0.07 | 0.04 | 0.63 | 0.67 | DEthreader | ETIKKAVESL-SLELVL-----------VENSLWQGVPNYLRELNE-QLEENLGYKLPVEF-VPV--RF--T--SW--MGGDRDGNPNVT------------ADITRHVLLLSRWKATDLFLKDILLYRLMKNLRSRLTGLLTQNEEGVPLVR-IDIR--QESTR--EALSAETREVLDTCQVIAEAP-------------------------------Q--GSIAAY-LAVHLLLKMPVAPLFETDDLGYDSAKAGVM----------------------AASWAQYQAQDALIKTCEKAGIE--LT--LFHGRGGGRVTEQGEMIRFKYITVSSLSLYTGAILEANLLPPPEP-------------------------------PLGSRPRIPWIFPAWLGAGL---------DWPFFSTRL-VVLAIAN-------------------------------- | |||||||||||||
6 | 5h11A | 0.10 | 0.09 | 0.86 | 0.98 | CEthreader | IFENKIQAHVKERLDETRNSDVEQYL--KNLYDLYTRTTALAAKLTDYNLGSDKHTFLSKLIKNIYIDMERQYLQNRSGMILQRYYDSKNHQKRIDTHG--ETLLSQEVVVNLLQETRHAFERCNKLSDPADLPKNAFSIFLILVEYLCVDHIDYALEIGLSAIPSADAKNAN-----LYFLDVVQQANTIFHLFDKQFNDHLMPLISSSP----KLTECLHKKKEVIEQMEVKLDTGIDRTLNCMIGQMKYILTTE-QKKTDFKPEDENNVMIQYTTACSKVCAYVGKQVERVRRSMDGKNVDTVLTELGVRFHRLIHEHLQQ--FSYSSMGGMLAICDVAEYRRSAKDFRVPLVLQLFDTLHALCNLLVVAPDNLKQVCSGEQLTNLDRNLLHAFVQLRVDYRSARLGRHFS-------------------------------------------------- | |||||||||||||
7 | 5h11A | 0.10 | 0.08 | 0.83 | 1.23 | EigenThreader | ENKIQAHVKERLDETRN----SDVEQYLKNLYDLYTRTTALAAKLTDYNLGSDKHTFLSKLIKNYIDMERQYLQNRSGMILQRYYDSKNHQKRIDTHGETLLSQEVVVNLLQETRHAFERCNKLSDPA-----DLPKNAFSIFLILVEYLCHIDYALEIGLSAIPSADANLYFLDVVQQANTIFHLFDKQFNDHLMPLISSSPK------------LTECLHKKKEVIEQMEVKLDTGIDRTLNCMIGQMKYILTTEQKKTDFK-PEDENNVMIQYTTACSKVCAYVGKQVERVRRSMDGKNVDTVLTELGVRFHRLIHEHLQQF--SYSSMGGMLAICDVAEYRRSAKD---FRVPLVLQLFDT--LHALCNLLVLKQVCSGEQLTNLDRNLLHAFVQLRVDYRSARLGRHFS-------------------------------------------------- | |||||||||||||
8 | 2fji1 | 0.11 | 0.08 | 0.77 | 0.39 | HHpred | -----------------------------------------------SHMGDKEKETLFKDYLNLIV-VKMTEWIGNLEKAEFDVFLERSPPHSDSDG-LLFLDGTKT-CFQMFTQQVEVAAG---T---NQAKILVGVVERFSDLL--TKRQKNWISEEIKKQINYDILVEYLIAVSNDQMKAADYAVAISSKYGKLV----S--K----VYEKQ---ITNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQEIF--SKTWYMG----------SQAQQIADTL-DEYLLDIKQMNSVLFVNFIDNVIGETIIKFLTALS-FEHSFKNKFLEAMKRDFEIFYQLFVKVL-DGNTLITQNF------TVMEFFMDLSCEPI-DSILDIQKYLEVYWDSRIDLKCRKDVSSSERKKVQQATEEYRRNME--ANGVDREPTLMRRFVLEFEKQ----------- | |||||||||||||
9 | 5yfpE | 0.11 | 0.08 | 0.74 | 0.55 | MRFsearch | ---QKIEPRFEVLLRNS------------LFTLFGKFTKSLIDYFQLLDSNQILSTTLEQCFADLFSVDMTSKFTVNYKEKLSTNTASDIDNSPNSPAN-YSLNDVDSMLKCVVESTARVMELI-------PNKAHLYILEILKIMFLGIVDSYMIALEVAYWKICKVVNLNFLKFISMSTEILDLLSISIKSIFLPLLNN-----------SPEIKAQIIEMTNSQIQKMEILINIILQETITVISTKFSAILCKQ--KKKDFVPK-SQELLDQDTLPAIEIVNILNLIFEQSSKFLKGKNLQTFLTLIGEELYGLLLSHYSH--FQVNSIGGVVVTKDIIGYQTAIEDW---GVASLIDKFATL------RELANLFTV---------------------------------------------------------QPELLESLT----------------- | |||||||||||||
10 | 6wc3A | 0.10 | 0.08 | 0.79 | 1.15 | FFAS-3D | -RARVPRRDLEHELLERRCDTELFVSTDDSVHELREKAGLLFQLLLLPEPRADQLWNFVCMANNFRIKKFLDKYLSENLYKYMDIFEDE---SKGITRTLIHKQFINHILEPVREKVNVTMTKIAASNSASDVKMLVLLISEIFITDNALKALEVWQNFEVESAVSQFNGADFGKLLENKYQLVDEIFIQLPLKYRSFLLNELTAEQQFENTSLLLISNILVRFDEVWESYDEAVIVLRDSIVHRWVKGLSSSLRNYF-KYNEW--DSIATAPEQCSAELVGALA-WMKKMTDIFDKYPQHIIAQIKVALLENIIKFMLNYVVKLN-KFSENGLRQLTFDYEALRATLGLPLEHSSVAE---------ELALFEYFNILSMKYTNN------------------------------------------------------------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |