Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | PPHLRRPTTLQQCEVVIRQLWNANLLQAQELQHLKSLLEGNQRPKAAPEEAGPSSPKDQEALHPGAMQFPKVPTKGVSKKCLILSPMPVAERAILPALKQTLKNNFAERQKRLQVVQSRRLHR |
1 | 1ga3A | 0.05 | 0.03 | 0.69 | 0.77 | DisCoVER | | -LRELIEELVNI-------TQNQKAPL-CGS-MV--WS--I----NLTAGMYCAALES---LI-NVSGCSAIEKTQRLSFCPVVRDTKI--EVAFVDLLHLKLFREGRF-------------- |
2 | 2rjsB | 0.09 | 0.07 | 0.80 | 0.83 | DEthreader | | GVGIGSLDGTSGMTGLGSLVVGRALEQAQQAEIVTALLIEAVRGLT----------LS-GLPSGDPGLHS-----------FAGAYPLVNNNLEYLVPTLRY-MAD-DIE-LVADALRGEFLR |
3 | 3hzsA | 0.11 | 0.11 | 1.00 | 0.48 | CEthreader | | DRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNIYNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAILASKVNSVYNINNMSENFTQRVSTNLEKMKQQ |
4 | 5xg2A | 0.07 | 0.07 | 1.00 | 0.60 | EigenThreader | | RWGKRKEKLIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELELELARKDLEKVLAEE |
5 | 1vt4I3 | 0.17 | 0.15 | 0.87 | 0.45 | HHpred | | -SDDLIPPYLDQYSHIGHHLKNIEHP---ERMTLFLDFRFKIRHDSTAWNASGSKFYKPYICDNDNAILDFLPKIEENLIC---SK---YTDLLRIALMAED---EAIFEEAHKQVQRGG--- |
6 | 1r05A | 0.15 | 0.06 | 0.37 | 0.40 | MRFsearch | | -----RAQILDKATEYIQYMRRKVHTLQQDIDDLKRQ--------------------------------------------------------------------NALLEQQVRALEGS---- |
7 | 5yi4A | 0.16 | 0.12 | 0.78 | 0.50 | FFAS-3D | | ----------EKCEAIGVKLLHLEDFQSGELQTVKETLQAMI-------------LQLQPTKEAGEASASYPTAGAQETEALVPRGSGFGTSPLTPSARISALNIVGDLLRKVGALESK---- |
8 | 3rj1C | 0.08 | 0.08 | 1.00 | 0.77 | SPARKS-K | | GQALDAVRRLAQLTHSLRRIRDEQSQLNVTLSQLVSVTSTLQHFQETLDSTVVYPLPKFPTTSHESLVTTLLRKKNIPEVDEWKYVRETSGVTTALLKDEEIEKLLQQDREITNWRNEYGKHD |
9 | 2xheB | 0.10 | 0.07 | 0.63 | 0.41 | CNFpred | | ---------NEKLQDTMARISALGNKIRADLKQIEKENKRAQQEGTFEDGTVSTDLRIR--------------------------------QSQHSSLS----RKFVKVMTRYNDVQAENKRR |
10 | 2b5uA | 0.07 | 0.06 | 0.85 | 0.83 | DEthreader | | ------AGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAASSAMESRKKKEDKKRSAENNLNDEKNKPRKGKDYGHDY-HPAPKRKRWTIYRASD--QH--LG--SFDPKT----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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