Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | LDWARLLRLAEHHRVVPAVYLQLKRINHPAIPAELLRNLQAQYQRNTLRMLRLQAEAGRVTRLLMNHGIRVLMLKGPALAQQLYGDVSLRTSKDVDLLIAPDDMDQAEQWMQEAGYVSKSGEARVLGSWKWKDHHASFLHPHKRVEIELHWRLHPDAGGEPSFEDLWKHRQIGEVTATGVPCVYTLGSEHQFLYLSAHGARHGWFRLRWLVDIDRLAVRAVDWEALLPMMRRYGGLPAGGQAWALAAALLG |
1 | 6j7nA | 0.15 | 0.12 | 0.77 | 1.00 | DEthreader | | ---------------------------------------GV-VFGRLQRHVAMIVVAQFAAT-LTDDGPLLLVKGGSSLELR-RGIPDSRTSKDFATVARR-DIELIHEQLADGIFTAPE--E-ID-VPGMPVKPRRFTAKAATVPIEVSSV--------EA--GNADQFDTLTSDGPAAVAVPCMTIPWQIAQKLHAVTALVNDRAHDLVDLQLLEGLLADLMPTRSACIAIFEHPWPPRVATDAAQAVR |
2 | 6j7nA | 0.15 | 0.12 | 0.77 | 1.00 | DEthreader | | ------------------------------------E--GV-VFGRLQRHVAMIVVAQFAAT-LTDDGPLLLVKGGSSLELR-RGIPDSRTSKDFATVAR-RDIELIHEQLADGIFTAPE--E--ID-P-MPVKPRRFTAKLATVPIEVSSV--------EA--GNADQFDTLTSDGPAAVAVPCMTIPWQIAQKLHAVTALVNDRAHDLVDLQLLEGLLADLMPTRSACIAFEQHPWPPRVATDAAQAVR |
3 | 4wqkA | 0.10 | 0.06 | 0.67 | 1.77 | HHpred | | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAI--DARLGRVTRKHDDIDLTFPGERRGELEAIVEMLGGRVMEEL----------DYGFLAE--IGDELLDCEPAWWADEEAEAPQGSCPE-AAEGVI-A--GRPVRCNSWEAIIWDYFYYADEPVDWPTKHIESYRLACT-SLGAEKVEVLRAAFRSR--------------- |
4 | 5uvdA | 0.14 | 0.11 | 0.75 | 1.03 | DisCoVER | | -------------A-------------------------------PL-SSDELKTVVSVLAQKLDSLNIDYAIMGGAATCLLS-GDPN-RRTEDVDLVIHVITADNLTTQLLKFPSDFE-----GV--SQFGHTIPAYKLRVQLVELEVFDYQSW--PQRPQY--DLQTATRTTLNINGQKVKLFS-PEWILREKILSQY--QRQEGTDIRDIISMIPLAVPGKPEL-NFNQSELQTALANLVQDLSSAL- |
5 | 5uvdA | 0.14 | 0.11 | 0.77 | 0.78 | MRFsearch | | ----------------------------------------------PLSSDELKTVVSVLAQKLDSLNIDYAIMGGAATC--LLSGDPNRRTEDVDLVIHVDHADNLTTQLLKS-FPSD---FEGVSQFGHTIPAYKLRRPGTVQLVELEVFDYQSWPQRPQYDLQTATRTTLNIN---GQKVKLFSPEWILREKILSQYQRQRKEGTDIRDIISMIPLELNFNQSQELQTA--LANLVQKRPDLSSALKA |
6 | 4wqkA | 0.11 | 0.07 | 0.67 | 0.94 | SPARKS-K | | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRV--TRKHDDIDLTFPGERRGELEAIVEMLGGRVMEELDY------------GFLAEIGDELLDCEPAWWADEAIAEAPQGSCPEAAEGVIA---GRPVRCNSWEAIIWDYFYYADEVPPWPTKHIESYRLACTSLGKVEVLRAAFRSRYAA--------------- |
7 | 6j7nA | 0.13 | 0.12 | 0.86 | 1.11 | MAPalign | | -----YSSPPTNLRSLRDRLTQVAE-----------------RQGVVFGRLQRHVAMIVVAQFAATLTDLLLVKGGSSLELRRG--IPSRTSKDFATVARELIHEQLADAGETWTAIFTAPEEIDVPGMPVKPRRFTAKLSYATVPIEVSSV----------EAGNADQFDTLTSDALAAVAVPCMTIPWQIAQKLHAVTPKVNDRAHDLVDLQLLEGLLPTRSACIAIFEARAQPRVAQAVQRFVARID- |
8 | 4wqkA | 0.09 | 0.06 | 0.69 | 0.90 | CEthreader | | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRV--TRKHDDIDLTFPGERRGELEAIVEMLGGRVM------------EELDYGFLAEIGDELLDCEPAWW-ADEAYEIAEAPQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEPVDWPTKHIESYRLACTSLGAEKVEVLRAAFRSRYAA------------- |
9 | 4wqkA | 0.11 | 0.08 | 0.67 | 0.79 | MUSTER | | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAIDARL---RVTRKHDDIDLTFPGERRGELEAIVEMLGGRVMEELDY------------GFLAEIGDELLDCEPAWWADEAYAEAPQGSCPEAAEGVI---AGRPVRCNSWEAIIWDYFYYADEPVDWPTKHIESYRLACTSAEKVEVLRAAFRSRYAA--------------- |
10 | 4wqkA | 0.12 | 0.08 | 0.67 | 2.50 | HHsearch | | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAID--ARLGRVTRKHDDIDLTFPGERRGELEAIVEMLGGRVMEEL----------DYGFLAE--IGDELLDCEPAWWADEAIEAPQGSCPE-AAEGVI-A--GRPVRCNSWEAIIWDYFYYADEPVDWPTKHIESYRLACTGAEKVEVLRAFRSRYAA---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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