>PF14906 (319 residues) NFVEACCKVATAVLERLEERSKEVPSKAPLQNLYAVLSTAVHVFQHFMMYDNLMRETSKK PLFLVPVQGYQEFINVLQFQVTNYCVRVCATSILQDAESHHWDDYKAFYEGERCSFSVQM WHYFCCALHHDLWTILPPKLAQEILEEVLEKSLAVLACRYSQAHPSYKRTPQIRIDITAI LVSTENMLWSACCSVQELLNPHKDKDAKIYKIHNHCNNLLSALAILTAPLKNLYETFQNG FGELLPSDFSKPNISHPLHWLSCITPFCPPLLMTPSTGEMAAQGQLKLLLSQPYCNWNLL LETLLHQDCLLVKILLKSS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | NFVEACCKVATAVLERLEERSKEVPSKAPLQNLYAVLSTAVHVFQHFMMYDNLMRETSKKPLFLVPVQGYQEFINVLQFQVTNYCVRVCATSILQDAESHHWDDYKAFYEGERCSFSVQMWHYFCCALHHDLWTILPPKLAQEILEEVLEKSLAVLACRYSQAHPSYKRTPQIRIDITAILVSTENMLWSACCSVQELLNPHKDKDAKIYKIHNHCNNLLSALAILTAPLKNLYETFQNGFGELLPSDFSKPNISHPLHWLSCITPFCPPLLMTPSTGEMAAQGQLKLLLSQPYCNWNLLLETLLHQDCLLVKILLKSS | |||||||||||||||||||
1 | 4y21A | 0.10 | 0.08 | 0.77 | 0.75 | DisCoVER | VILDENEEVSRDFLHGALERDKKGF--Q----Q---------------------------------------TSEHAL---FSCSVVDVFSQLNQSFEIICPDPQIVGYMRRFAKTISNVLLQYADIVSKDFASYCKEKVPCILM-NNTQQLRVQLEKMFEAMGGKELDAEASGTLKELQVKLNNVLIEECVRQMGDILVKGCSSVAQDADNVLQPIMDLLDLFAIC-------------------EKTVLKRVLKELWKLVMNTMETI-VPPAKSLTPKQCAVVELALKQYFLLPDLQSLRYALSLYTQA--TDLL-- | |||||||||||||
2 | 4a01A | 0.05 | 0.03 | 0.75 | 0.83 | DEthreader | AFITAFRSGAVMFLLAANGLLVLYAILFEITGYGLGGSSALFGRVGGGIYTKAADDEDVIDNVGDNVGIAGMGSDLFGYASLSSVGILVCLLTTLFATD-FFEIKAVKEIEPALKKQLVISTVLMTIVFLCVSFAMYGIAVAALGMLSTIATGLAIDAYGPISDNATDLDAAGNTTAAIGKGFAIGSAALV----------VL----------G---P----------------------PGLVT--ETLSVLA-SLVSGVQIAISA----T---W-NAKKGDTIGDPLKDTSGP-L---------------------- | |||||||||||||
3 | 4y21A | 0.11 | 0.10 | 0.97 | 0.70 | CEthreader | NVGKISAEVMWSLFAQDMKYAMEEHDKHRLCKSADYMNLHFKVKWLYNEYVAELPTFKDR------VPEYPAWFEPFVIQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLEIVGHYMRRFAKTISNVLLQYADIVSKDYCSKEKEKVPCILMNNTQQLRVQLEKMFEAMGGKELDAEA--SGTLKELQVKLNNVLDELSHVFATVRQMGDILSQVKGTGNVPASACSSVAQDADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVLPPEFSKLKDHMVR | |||||||||||||
4 | 4y21A | 0.08 | 0.08 | 0.92 | 0.92 | EigenThreader | LNISAEVMWSLFAQDMKYAMEEHDKHRLCK--SADYMNLHFKVKWLYNEYVTFKDRVPE----------YPAWFEPFVIQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLECPGHYMRRFAKTISNVLLQYADIVSKSYCSKEKEKVPCILMNNTQQLRVQLEKMFEAMG-----GKELDAEASGTLKELQVKLNNVLDELSHVFATSVRQMGDILSQVKGTGNVPASACSSVAQDADNVLQPIMDLLD-----SNLTLFAKIC-----EKTVLKRVLKELWKLVMNTMERTIV | |||||||||||||
5 | 2fji1 | 0.12 | 0.10 | 0.82 | 0.32 | HHpred | -VVERFSDLLTKISEEIKKQINYECPGGLVEYLIAVSNDQMKAADYAVAISSKYGKLVSKVYEKQITNHLEGTLDGFA-EVAQCSSLGLITLMFDDLRKP-YQESKTWYMGSQAQQIADTLDEYL----LDIKPQMNSVLFVNFIDNVIGETIIKFLTALSFEHSKNKFLEAMKRDFEIFYQLFVKVL----D--------GN--ESKDTLITQNFTVMEFFMDLSCEPIDSILDIWQKYLEVYW--------DSR-IDLLVGIL--K---CRKDVSERKKIVQQATEMLHEYRR------------------------ | |||||||||||||
6 | 2fji1 | 0.11 | 0.09 | 0.78 | 0.47 | MRFsearch | --VERFSDLLTKRQKNWISKISEEIKKGLVEYLIAVSNDQMKAADYAVAISSKYGKLVSKVYEKQITNHLEGTLDGFA-EVAQCSSLGLITLMFDDLRKPTWYMG----------SQAQQIADTLDEYLLDIKPQMNSVLFVNFIDNVIGETIIKFLTALSFEHSFKNKNNKFLEAMKRDFEIFYQLFVKVL----------DGNESKDTLITQNFTVMEFFMDLSCEPIDSILDIW------------------------------------------------QKYLEVYWDSRIDLLVGILKCRSSSERKKIVQQA | |||||||||||||
7 | 2f6hX | 0.10 | 0.09 | 0.90 | 0.95 | FFAS-3D | GLTKQSESFLAQVLTTIQKVVTQLKGNDLIPSGVFWLANVRELYSFVVFALNSILTEETMTLVTELKDDFEALSYNIYNIWLKKLQKQLQKKAIN------AVVISESLPGFSAEYTMDDILTFFNSIYWCMKSFIENEVFHAVVTTLLNYVDAICFNELIMKRNSWKRGLQLNYNVTRLEEWCKTHCLQHLIQTAKLLQVRKYTIEDIDILRGICYSLLQKLISQYQVLRYVADIVKKEAALSSSGSIFITPETGPFTDFSLIKTRKFDQVEAYIPAWLSTKRIVDLVAQQ--------------------------- | |||||||||||||
8 | 5vchA | 0.07 | 0.07 | 0.97 | 0.68 | SPARKS-K | QYAAKFASLIPSVVQVLDATIRE---GDTTKLIFNCLNDFLTIADLVKLALQIAVNSDDEDIRVFAVQFVTSALVYRKSKINQAITLAALKVASEEIDVEDELTNED--ENTPALTALRLISNASGEVGVPIIEHLSPDYTLSQFDKIIPATVTGLIVQLSTNLQDERYHEQYLPLVIDIIDYATLALDGLLEFLNKLFQLETQQS---PKLRAAIVSAIGSCAFAAGSFKTSVQYLQQFIQNVSQIE-GLSEDDIELKALTFENISTGRAVKSAAEYAEPLVNAAYEAIKTDSARRESGYAFIANAKVYIIPEIFKTL | |||||||||||||
9 | 4gmxC | 0.10 | 0.09 | 0.89 | 1.00 | CNFpred | YVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEER-----------------AERNRLLSDLMQLPNMAWDTILDSETVKIIA--NIIKTNVAVCTSMGA---------DFYPQLGHIYYNMLQLYRAVSSMISAQVAAE-PKVRGLRTIKKEILKLVETYISKARNLDDVVKVLVEPLLNAVLEDYMNNPDARDAEVLNCMTTVVEKVGHPQGILQSVFECTLDMINKDF--EYPEHRVEFY----KLLKVINEKS | |||||||||||||
10 | 6wc3A | 0.09 | 0.07 | 0.75 | 1.00 | DEthreader | KLVDEIIQLPLKYRSFLLSKNILQNLAQQFENTCVKLHSLLLISNILVRFSHDFIETQIYYIFDEVWESYDEAVIVLRDSIVHRWVKGLSSSLRNYFKYNE-------ATPQCSAELVGALAWMKKMTDIFDKYWYPQHIIAQIKVALLENIIKFMLNYVVKLNK---FSENGLRQLTFDYEALRATLGLPLEH--SS----------VAEELALFEYFNILSMK-YTN--SKFLDAEYVSSHHTRN-----------F-RELRES-------------------L---QVSH------------------IA-ALY-T | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |