Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | ETGNISLSLTASTGFSANTRSVNEADYKNVNQYTIQILNSAGVEKVNYLYDDLPSKIKLENGSYTLKAFYGEDKDASRNGFYVEGSSTFTVQGADQTLNVDCAPVCGKVAVNFDESMDKYFSDYSVVYETSALTAANTTATWVKADTEPWYLKLNKDGETVKATIHVTRTSDGKSITTEKTYNLERNKSWTLNIAPKDDNGSMTITISIDESTEDHEIDIVVP |
1 | 4gpvA | 0.14 | 0.13 | 0.93 | 1.17 | DEthreader | | EQAVLTIKLKGD-GD-PAT-DTED--AVI-NNYLVFLFREGGALCAPYEGSSAATITTGTTAAKKAYVVANTGSLSQTKTNLWSGESEVKFGGTNAQVTVSLSFVAAKIQLIVKDNRKTITDDAAVLLFAGQEFGVTTSLSDAVSDFNHFYTFGNDGTQPTILAIKSTKTVGSSPIFYPILFTIEPGKSYTVTVTLNGDAAGGGGIEVTVTAA---------- |
2 | 4gpvA | 0.12 | 0.11 | 0.91 | 1.17 | DEthreader | | EQAVLTIKLKGD--GDPATDTE---DAV-I-NNYLVFLFRGALCAPYEGSSNAATITTGTTAAKKAYVVANTGSLSQTKTNLWSGESEVKFGGTNAQVTVSLSFVAAKIQLIVKDNRKTITDDAAVLLFAGTQNEFYTGLSDAVSDFNHFYTFG---NDGPTILAIKSTKTVSSPIFPILFTTIEPGKSYTVTVTLNGDAGGGSIEVTVTAAQ---------- |
3 | 6jzjA | 0.14 | 0.13 | 0.92 | 1.16 | MAPalign | | GNATISVVLKTS------------DDESKVAKLTVMVYNG-EQQEAIKSENAKVEDIKCSAGQRTLVVMANTGTELNQTGLIMTAPVDVTLVAGNNYYPLEIKRVHARMAFTEKVQMKYNFAPENIYALVAKDDAYLTGLGRYTGAAKGFYVLESTYARPTILCVKGKLTKNDPTTYYPVLVNIERNHKYDIKLTITGITESAHLNVKCTVAEWVLVG----- |
4 | 4gpvA | 0.12 | 0.12 | 0.97 | 1.08 | CEthreader | | EQAVLTIKLKGDGDP------ATDTEDAVINNYLVFLFREGGALDCAPYENAAATITTGTTAAKKAYVVANTGASTQTKTNLWSGESEVKFGGTNAQVTVSLSFVAAKIQLIVKDNRKNTITDDAAVLLFAFDSGVTTSTALSDVFNHFYTFGNDGTTQPTILAIKSTKTVGSSPIFYPILFTIEPGKSYTVTVTLNGDVAAGGGGGTTDPEEPVVSSSIEVT |
5 | 5nf4A | 0.10 | 0.09 | 0.83 | 1.00 | DEthreader | | PDVYLLVNARAA----------------RVHSLAMLVFDSNGEKVAEHFSSSYVFTVKLKPGQRDFFFVAIPLDPHYNAGFPMSRMYQTVTIGGLPFKNVKLQRVVAKLDVNIV-EGV-EN-LQKIELCNANVQFYGPVELRRVGAQWLGYMPEAIVKPINFFRLTTR-----GGLVYDVPIYTVYRRHYIYRIKTL----PDKIEVKYSICD---------- |
6 | 4qdgA | 0.11 | 0.10 | 0.91 | 1.17 | DEthreader | | PPHGVSLRFIYD-YNEY-A--NAFAKKVD--CLTLLVYDENGNYVDTRIVTGEYRKLDLKQGNYHFVAYGGLSFLCKNLHGLYWGELTLATA-DLYSEGTVE-KNTNNIRVVLQQEPVD-DKKFEFEITDDNIENGV-TYTPAQGQYAELSTSRLVRWYSPKLTVRRK----ADGVEINIPLILLDRESEWSIFFLSP---NLEWIKYIKINDWTVRIN---- |
7 | 4qdgA | 0.10 | 0.09 | 0.91 | 1.17 | DEthreader | | PPHGVSLRFIYD--YNEYA-N-AF-AKKVD-CLTLLVYDENGNYVDTRIVTGEYRKLDLKQGNYHFVAYGGLSFLCKNLHGLYWGELTLATADLYSEGTVE--KNTNNIRVVLQQEPVD-DKKFEFEITDDNILENGVTYTPAQGQYAELSTSRLVRDYSPKLTVRRK----ADGVEINIPLIQLDRESEWSIFFLSP---NLEWIKIKIN-DWTVRIN---- |
8 | 5nf4A | 0.14 | 0.12 | 0.85 | 1.13 | MAPalign | | PDVYLLVNARAADFE------------DRVHSLAMLVFDSTGEKVAEHFSGTYVFTVKLKPGQRDFFFVANIFRDLYHNGFPMSRMYNQTVTIGPLPFNVKLQRVVAKLDVNIV-EGVENLQKIELCANVHNQSEPIQFYPVELRNQWLGYMPE---AIVPINFFRLTTRG-GLVYDVPISYTVYRNRHYIYRIKTLP----DKIEVKYSI------------ |
9 | 5nf4A | 0.13 | 0.11 | 0.89 | 1.07 | CEthreader | | PDVYLLVNARAAD------------FEDRVHSLAMLVFDSNTGEKVAEHFSSYVFTVKLKPGQRDFFFVANINATNNNGFPMSRMYSNQTVTIGGTINNVKLQRVVAKLDVNIVEG-VENLQKIELCNANNQSEPIQFYGPVELRRQWLGYMPEGNAENKPINFFRLTTRGGLVYDVPIITPSYTVYRNRHYIYRIKTLPDKIEVKYSICDW----------- |
10 | 4k4kA | 0.08 | 0.07 | 0.84 | 1.00 | DEthreader | | GRVALEATSGKTW----------------DA-IGIY-LN-GDATDGGRKYTTFTATIYFPASQRDFVAYYYTVDVSQTPDIDLGAAKVEGKDKTDPKVAFVFTHKLVKLDITIKAGTDADLAGTTVSISNQQTGTTKEIVLHTDGLKAEGIVLPAA-STAGALTFTVPGL--EGQAFHWDVNAFVAGSKYLYTITIS----KAGVEVSSKVEDW--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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