>PF14893 (324 residues) MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAMPQVPYRVLGRMFWREEN AKAALLELTGAVDYAAIPREMPGKGGVWKVVFKPPTSDAEFLERLHLFLAREGWTVQDVA RVLGFQNPTPSPGPEMPAEMLNYILDNVIQPLVESIWYKKLTLFSGRDIPGPGEETFDPW LEHTNEVIEEWQVSDVEKRRRLMESLRGPAADVIRILKTNNPAITTTECLKALEQVFGSV ESSRDAQVKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGANH SGAIRRQLWLTGAAEGPAPNLFQL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAMPQVPYRVLGRMFWREENAKAALLELTGAVDYAAIPREMPGKGGVWKVVFKPPTSDAEFLERLHLFLAREGWTVQDVARVLGFQNPTPSPGPEMPAEMLNYILDNVIQPLVESIWYKKLTLFSGRDIPGPGEETFDPWLEHTNEVIEEWQVSDVEKRRRLMESLRGPAADVIRILKTNNPAITTTECLKALEQVFGSVESSRDAQVKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGANHSGAIRRQLWLTGAAEGPAPNLFQL | |||||||||||||||||||
1 | 6tapA | 0.13 | 0.06 | 0.47 | 1.18 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------GNFSACTHSFGGTR----DHDVVEEFIGNIETYKDVEGISDENALKGISLLFYGMASTWWQGVR--KEATTWKEAIALIREHFSPTKPAYQIYMEFFQNKQDDHDPIDTFVIQKRALLAQLPS-GR----HDEETEL-DLLFGLLNI-----KYRKH-ISRHSVHTFKDL | |||||||||||||
2 | 6tapA | 0.12 | 0.05 | 0.45 | 1.01 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------------------------------------------ACTHSFGGTR----DHDVVEEFIGNIETYKDVEGISDENALKGISLLFYGMASTWWQGVRKEATT--WKEAIALIREHFSPTKPAYQIYMEFFQNKQDDHDPIDTFVIQKRALLAQLPSGRH-----DEETELDLLFGLLNIKKDLLEQGRIIEHNN--------- | |||||||||||||
3 | 4p6qA | 0.08 | 0.06 | 0.66 | 0.72 | DisCoVER | ------------------FGIKVQNLPVRSTDTSLKGLFHEFKKFGKVTSVQIHG--TSEERYGLVFFRQQDQEKALSKGKLFFGMQIEVTAW---------------------------------------------------IGPETESENEFRPLIDE--FHPKATRT------------LF--IG---N-L--EKTTTYH-FQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKLGFGK--S--MP-TNC-----V--WL--DGLSSNVSDFYGPVVKVVFD-RLKGMALVLYNEIEYAQAAVKETKGGNKIKVDFAN- | |||||||||||||
4 | 5m59A | 0.06 | 0.05 | 0.72 | 0.67 | DEthreader | V-GL-----------V----------AFKIVYIIVTTPEKWDVIRDRPVLEVTIRTEQTGEPVIFSQLSKLVDLNAEIVL----------GNVRNRDEGVEEQRVDLIHSAAMVLKSNLIKYMQATE-----------RIASHYYISHESMDTYKLVFAQSGEF------------KY--IP-VR-Q---------EEKLELAK---------LL-ARVPIPVKESIEEPTAKINLDM-YVTQSAGRILRAIFEICL-KKGW-ASVAKLALNMCKMAKRMWPTM---PW-PR-SFWILVEILFHDV--FI-LRK---SDRWMHS | |||||||||||||
5 | 6r5kD | 0.10 | 0.09 | 0.94 | 0.51 | CEthreader | ------------------ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVC-RDAITKTSLGYAYVNFNDHEAGRKALNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFV | |||||||||||||
6 | 4n0tA | 0.10 | 0.06 | 0.63 | 0.75 | EigenThreader | -------------RNRELTTVLVKNLPKSYNQNKVYKYFKHCG---PIIHVDVADSLKKNFRFARIEFARYDGALAAITKTHKVQNEIIVSHL----------------------------------------------------------------TECTLWFP-------PSYTQRNIRDLLQDIN----VSKEDARYCVEKLNGLS------------KRTDSATLE--------GLLDENLLRESFEGFGSEHSFNNKDSAERALQMN------RSDKKPFLERNEVKRLLA--SRNSKELESLICQFLQEEIHINEKDI | |||||||||||||
7 | 6gseA | 0.17 | 0.07 | 0.44 | 1.15 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------SPGLDTQIF-----EDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQ--GSVKNWVEFKKEFLQYSEGTLSREAIQREL-DLPQKQGEPLDQFLWRKRDLYQTLYVD------AEEEEIIQYVVGTLQPK--FK----RF-LRHPLPKTLEQL | |||||||||||||
8 | 6taqB | 0.17 | 0.08 | 0.46 | 0.80 | MRFsearch | ----------------------------------------------------------------------------------------FSNC--------------------------------------------------------------------TVRFSGQR----DHDAVDEFINAVETYKEVEGISDKDALKGLPLLFKSIAVVWWKGVRRD--AKTWSDALQLLRDHFSPTKPSYQIYMEIFETKQSYDEVIDSFICKQRALLAKLPE-----GRHDEETELDFIYGLM--QPKYRESIPRH-----EVKTFREL | |||||||||||||
9 | 6taqB | 0.15 | 0.07 | 0.44 | 1.00 | FFAS-3D | -----------------------------------------------------------------------------------------------------------------------------------------------------------------VRFSGQ----RDHDAVDEFINAVETYKEVEGISDKDALKGLPLLFKSIAVVWWKGVRRDAK--TWSDALQLLRDHFSPTKPSYQIYMEIFETKQSYDEVIDSFICKQRALLAKLPEGRH-----DEETELDFIYGLMQPKRELLDRGRTVERTR--------- | |||||||||||||
10 | 6w2wA | 0.11 | 0.07 | 0.65 | 0.60 | SPARKS-K | -----------------------------------------------------------------------------SEEVNERVKQLAEKAKEATDKEEVIEIVKELAELAKQSAEIVYQLAEVAEHSTD------PELIKEILQEALRLAEEQGD-------------EELAEAARLALKAARLLEEARQLLSKEAAKECLKAVRAEAALLALLLLAKHPGSAAQDAVQLATAALRAVEAACQLAKQY-----PNSDIAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQAEEVKERCERA------------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |