Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | KALNPAITVLVYKDLSSTRSYETATLHGGLLPTGVDFAATEREHPDWFATDTGGRRVEWAPYPQHWQMAVWNADYQREWTTAVTTEAVRDGWDGVFADNDFASLGFYSDAVLAGTSSRAETDRLLRDGLDRMVAVAGSALAAQGKLFIPNLSEARLYPGRWTEHARFGGAMEENFAQYAGDELLTWQGTQWEEMVRTSSDGKHLNLLVTKTAGVPESSPGAAGRAGFAGAALLAGDRACWTGPDAGDYSRPAFSGYQSLALGEPRGPAVQQDSGVWTREFTGGW |
1 | 5gslA | 0.06 | 0.06 | 0.93 | 1.17 | DEthreader | | LLAQGLYVIIRPGPYIC-EWK---------NGG-IPDWLINSHPE-ILAKSPNGSFPRDV-Y--YPPITYLHPTYLEYAMKWYEEVLPIIDYIVTIDDEPSYETIFQPFLTDYNEIIVPPWHHFKIWMINEYVRRLYEKIREYVVPISLLDPLLLAAWKEFYYVTLIHLWTEFWYSFDFKEDKLGHLYFKTGIYRYYVSKTPPLSETQASLAN--VIEK-DEAELLYALLPALGIH-NLNYYLYHNWDVSPIHVEPIKWEFLIVDSQFKARVNVPIPRYFPITP |
2 | 6lvwA1 | 0.09 | 0.08 | 0.92 | 1.17 | DEthreader | | DEIELIGQAVLCTPTATPPK---------W-----LVDERP---S-IRQEDPDGTVREH---GSRRHYCFNSDAYREETARIVERVTERYAPVGWQTDNEFGCHETVRC-YCDDPPGLLAYARFSSDSVVEYNRLHADLIREADWFVTHNFMGRFPTLNAYDVSEDLDRVAWDSYPTGFVQYGDDQVGMDHDIYRSA-LDRPFWVMEQQGDVHCPQPG-EGAMRLWAHHAAAHGADAVLYFRRRQYHAGLRDGYADAAHEEFLDASVAGVAERLRIGYTWLAVV |
3 | 2aamB | 0.12 | 0.10 | 0.77 | 1.77 | HHpred | | I-VDAGVVPVAYVNIGQAEDYRF------YWKE----SW-YTNTPEWLGE-------EDPAWPGNYFVKYWYNEWKEIVFSYL-DRVIDQGFKGIYLDRIDSFEYWAQ----EG-----VISRRSAARKINFVLEIAEYVRERDL-IIPQNGENILDFD-DGQLATVSGWAVENLFYLKTILEENETKSRLEYLIRLNRKGKFILSVDYVDDG---SDSRILDYYE----KAKRNGCIPYAARSDLELDEN-VIEGIQP------------------------- |
4 | 2aamB | 0.12 | 0.10 | 0.77 | 0.74 | DisCoVER | | FDNWGFEIPVAYVNIGQAEDYR-------FYWEWL--------------------GEEDPAWPGNYFVKYWYNEWKEIVFSYLDRVID-QGFKGIYLDRID-SFEYWAQGVI--SRRSAAR---K---I-NFVLEIAEYVRERKDLIIPQNGENILDFDDGQLASTVSGWAVENLFYLK-TIPLEETKSRLEYLIRLNRKGKFILSVDYVDDGSDSFENISRILDYYEKAKRNG-CIP-YAARSDLEL-DENVIEGI------QPPE----------------- |
5 | 2aamB | 0.10 | 0.07 | 0.73 | 0.85 | MRFsearch | | ------VVPVAYVNIGQAEDYRFY-----------WKESWYTNTPEWLGE-------EDPAWPGNYFVKYWYNEWKEIVFSY-LDRVIDQGFKGIYLDRIDSFEYWAQEG---------VISRRSAARKINFVLEIAEYVRERDLIIPQNGENILDFD-DGQLASTVSGWAVENLFYLKTIPEENETKSRLEYLIRLNRKGKFILSVDYVDDGSDSFENISRILDYY--EKAKRNGCIPYAAR----------------------------------------- |
6 | 2aamB | 0.12 | 0.10 | 0.81 | 1.14 | SPARKS-K | | KIVDAGVVPVAYVNIGQAEDYRF-------YWKE----SWYTNTPEWL-------GEEDPAWPGNYFVKYWYNEWKEIVFSYLDRVIDQ-GFKGIYLDRIDSFEYWAQEG---------VISRRSAARKINFVLEIAEYVREPDLIIPQNGENILFDDGQLASTV--SGWAVENLFYLKTIPLENETKSRLEYLIRLNRKGKFILSVDYVDD--GSDSFENISRILDYYEKAKRNGCIPYAARSDLELDENVIEGIQPPEA----------------------- |
7 | 3wnkA | 0.09 | 0.08 | 0.89 | 0.63 | MAPalign | | IVHDVNGKAMAYAMIYASRE------------NYSPLGISP----TWGIYESHTNQFDVDGSTYLYMFDPQNPNWQNYIHAEYIDSINTAGFDGIHVD-QMGQRSNV----YDYNGNS--ID--LSTRFSPFLDQAKSVLSANNRNLTYNIVDGTVNGWAVNDVSDLDFLYSEIWYL------SDSYNQLKNYIEQLRANGKAVVLAAMNDSLTLGTFDEHSVRLADAMMSASG-ATHIMLPHEYYPNRSKTMLKAMDGSANTVWYINKRTSDYNIVHLLLGND |
8 | 2aamB | 0.13 | 0.10 | 0.81 | 0.61 | CEthreader | | KIVDAGVVPVAYVNIGQAEDYR-----------FYWKESWYTNTPEWLGE-------EDPAWPGNYFVKYWYNEWKEIVFSYLDRVIDQ-GFKGIYLDRI---------DSFEYWAQEGVISRRSAARKINFVLEIAEYVRERKPLIIPQNGENILDFDDGQLASTVSGWAVENLFYKTIPLEENETKSRLEYLIRLNRKGKFILSVDYVDDGSDSFENISRILDYYEKAKRN--GCIPYAARSDLELDENVIEGIQPPEA----------------------- |
9 | 2aamB | 0.13 | 0.11 | 0.81 | 0.60 | MUSTER | | KIVDAGVVPVAYVNIGQAEDYRFYWK-----------ESWYTNTPEWLGEEDPA-------WPGNYFVKYWYNEWKEIVFSYLDRVIDQ--FKGIYLDRIDSFEYWAQEGVIS---------RRSAARKINFVLEIAEYVRERKPLIIPQNGENILDFDDGQLASTVSGWAVENFYLKTIPLEENETKSRLEYLIRLNRKGKFILSVDYVDDG--SDSFENISRILDYYEKAKRNGCIPYAARSDLELDENVIEGIQPPEA----------------------- |
10 | 2aamB | 0.11 | 0.09 | 0.80 | 2.61 | HHsearch | | I-VDAGVVPVAYVNIGQAEDYRF-------YWK----ESWYTNTPEWLGE-------EDPAWPGNYFVKYWYNEWKEIVFSYL-DRVIDQGFKGIYLDRIDSFEYWAQE---------GVISRRSAARKINFVLEIAEYVRKPDLIIPQNGENIL--DFDGQLASTVSGWAVENLFYLKTIPLENETKSRLEYLIRLNRKGKFILSVDYVDDG--SDSFENISRILDYYEKAKRNGCIPYAARSDLELDEN-VIEGIQP----PEA------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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