Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | APTLSAETVRYWSDYNRLFYHPRSIVQLNDYELNSKIMPFEDWTIGEELFNELDKEHDLLDRDVRPFAEECDQLRALQIFTGSDDAWGGFAAKYIDRIRDEYGKKSVWVWAIENGKKVDRQTQFKRDLNKARSVHAISTQASLYAPIIDPPSRIPQSIYLDARSEWYTSALVSAAMESVSLPTRL |
1 | 6kppA1 | 0.16 | 0.15 | 0.91 | 1.17 | DEthreader | | --------I-NAWELYCIFFFVPRAVFVDLEPTV--EDAANNYARGHTIGKEII--DLVLDR-IRKLADQCTGLQGFLVFHSFGGGTSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA-V-VEPYNSILTTHTTLEHSDCAFMVDNEYDICRRNLDIERPTYTNLNRLISQIVSSITASNVD |
2 | 6kppB | 0.21 | 0.19 | 0.88 | 1.17 | DEthreader | | ----------IGAKFWESPAFRPDNFVFGQSG-----AGNN-WAKGYTEGAEL--VDSVLD-VVRKESESCDCLQGFQLTHSLGGGTSGMGTLLISKIREEYPDRIMNTFSVMPSPKSD--TV-VEPYNATLSVHQLVENTDETYCIDNEYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRG |
3 | 5flzC | 0.13 | 0.12 | 0.92 | 2.90 | HHpred | | ---SEPSVIADVENTFRGFFDPRNTWVASD-----GASAGNSWANGYDIGTR--NQDDILNK-IDKEIDSTDNFEGFQLLHSVAGGTSGLGSNLLEALCDRYPKKILTTYSVFPARS---SEVVVQSYNTILALRRLIEDSDATVVFDNASLLSGKVFRNPNIDLQHTNQLISTIISSVTNSIRF |
4 | 3hkeD | 0.20 | 0.19 | 0.97 | 0.91 | DisCoVER | | VHIQAGQCGNQIGAKFVIVYYNERAILVDLETMFGQSGAGNNWAKGHTEGAEL--VDSVL-DVVRKESESCDCLQGFQLTHSLGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKV--SDTVVEPYNATLSVHQLVENTDETYSIDNEALYICFTLKLTTPTYGDLNHLVSATMSGVLRDLR- |
5 | 5flzC | 0.13 | 0.12 | 0.90 | 0.57 | MRFsearch | | -------VIADVENTFRGFFDPRNTWVASD-----GASAGNSWANGYDI---GTRNQDDILNKIDKEIDSTDNFEGFQLLHSVAGGGSGLGSNLLEALCDRYPKKILTTYSVFPAR---SSEVVVQSYNTILALRRLIEDSDATVVFDNASLLSGKVFRNPNIDLQHTNQLISTIISSVTNSIRF |
6 | 6gj4A | 0.16 | 0.15 | 0.94 | 1.60 | SPARKS-K | | VDLEPTVIDEVRTGTYRQLFHPEQLITGKE-------DAANNYARGHTIGKEI---IDLVLDRIRKLADQCTGLQGFLVFHSFGGGTSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV--VEPYNSILTTHTTLEHSDCAFMVDNEAIYCRRNLDIERPTYTNLNRLISQIVSSITASLRF |
7 | 6kppB | 0.18 | 0.17 | 0.96 | 0.92 | MAPalign | | -HIQAGQCGNQIGAKFWEVKYVPRAILVDLEFVFGQSGAGNNWAKGHTEGAEL--VDSVLD-VVRKESESCDCLQGFQLTHSLGGGGSGMGTLLISKIREEYPDRIMNTFSVMPSPK--VSDTVVEPYNATLSVHQLVENTDETYCIDNEYDICFRTLKLTTPTYGDLNHLVSATMSGVLRKLA- |
8 | 3cb2A | 0.14 | 0.14 | 0.95 | 0.79 | CEthreader | | LDLEPRVIHSILNSPYAKLYNPENIYLSEHG-----GGAGNNWASGFSQGEKI--HEDIFDIIDREADG-SDSLEGFVLCHSIAGGTSGLGSYLLERLNDRYPKKLVQTYSVFPNQ-DEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNATDRLHIQNPSFSQINQLVSTIMSASTTTLRY |
9 | 2btqB1 | 0.16 | 0.15 | 0.94 | 1.21 | MUSTER | | AGTLKESNMEFFHDLEPQLFDESSIVRKIP-------GAANNWARGYNVEGE--KVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGGLGSLILERLRQAYPKKRIFTFSVVPSPLISDS--AVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLNRSNYMDLNNIIALIVSSVTASLRF |
10 | 2btoB | 0.12 | 0.11 | 0.89 | 2.59 | HHsearch | | EPSV-IDNVK--ATS-GSLFNPANLISR-------TEGAGGNFAVGYLGAGRE-VLPEVMSR-LDYEIDKCDNVGGIIVLHAIGGGTSGFGALLIESLKEKYGEIPVLSCAVLPSP-------VTEPYNTVFALNTLRRSADACLIFDNEALFAHRKWNIESPTVDDLNLLITEALAGITASMRF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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