Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DKEEFAKTLEEAHVDSITCFARCHHGWLYYPSKKFPELIHPGLKNKNFLLEQIEACHKRGIKVPVYTTAQWDGRIMREHPEWLAVDENGEFIDTQGVPAPHFYHTICLNSGYRQFFKDQLQDMIEVIGVENLDGIFMDI |
1 | 3wdjA | 0.12 | 0.11 | 0.92 | 1.17 | DEthreader | | GLERGLSYIKQLGVTHVQLPVQDFEGVGYNTV-HYN-APEGSYARIIELKRAIRAFQQEGIRVILDVVYHVVRSSFEHVGYYFRYE-RNGYPSN----GT-GVGNDLSRKMVKKFIIDSVTYWLKEY-G--VDGFRFDL |
2 | 4s1aA | 0.14 | 0.12 | 0.90 | 1.09 | HHpred | | RLQHYVDLANRTEINAYVVDIKDDDGYVGYESNI-PGAWKS-K---YNVDKVLKTFHDNNIHVIGRLVCFKDPVLSSKKPELAVKSVNGGSWR----DNHNLTW-LDPYNDSWPYLIEIAKEAVEK-G---FDEIQFDY |
3 | 4s1aA | 0.13 | 0.12 | 0.91 | 0.90 | DisCoVER | | VGSDLVDLANRTEINAYVVDIKDDDGYVGYESIAVREIAWKSKY---NVDKVLKTFHDNNIHVIGRLVCFKDPVLSSKKPELAVKSVNGGSWRDNHNLT----WLDPYNKDSWPYLIEIAKEAVE-K---GFDEIQFD- |
4 | 4gklA1 | 0.18 | 0.17 | 0.93 | 0.33 | MRFsearch | | --EKDLERLKGMGINTVWLMPIGTLGSPYAIRDYY--EIDLLIGTKGDFKKFVKRAHELNMYVLMDMVLAVDNVLVKKHPEWFLRDENGNPTRK---VPSDVVDFDYSNGELREYMINMMRYWVEEF---DVDGFRCDV |
5 | 4s1aA | 0.14 | 0.13 | 0.94 | 1.32 | SPARKS-K | | RLQHYVDLANRTEINAYVVDIKDDDGYVGYESNIPAVREIGAWKSKYNVDKVLKTFHDNNIHVIGRLVCFKDPVLSSKKPELAVKSVNGGSWRDNHNL----TWLDPYNKDSWPYLIEIAKEAVEKG----FDEIQFDY |
6 | 3bh4A1 | 0.15 | 0.14 | 0.97 | 0.50 | MAPalign | | RLQNDAEHLSDIGITAVWIPAYKYDLYDLGEFQQKGTVRTKYGT-KSELQDAIGSLHSRNVQVYGDVVNHKAGADTKWHWYHFDGARIFKFWDENGNYDYLMYADVDYHPDVVAETKKWGIWYANEL---SLDGFRIDA |
7 | 2zx9A | 0.14 | 0.12 | 0.86 | 0.48 | CEthreader | | DPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRFT----------------TEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYL---PDVLWNDM |
8 | 4s1aA | 0.14 | 0.13 | 0.94 | 1.12 | MUSTER | | RLQHYVDLANRTEINAYVVDIKDDDGYVGYESNIPAVREIGAWKSKYNVDKVLKTFHDNNIHVIGRLVCFKDPVLSSKKPELAVKSVNGGSWRDNHNLT----WLDPYNKDSWPYLIEIAKEAVEK-----FDEIQFDY |
9 | 4gklA1 | 0.18 | 0.17 | 0.92 | 0.79 | HHsearch | | SLEKDLERLKGMGINTVWLMPIHPTGSPYAIRDY--YEIDLLIGTKGDFKKFVKRAHELNMYVLMLNHAAVDNVLVKKHPEWFLRDENGNPTRK-----VP-SDVVDFDGELREYMINMMRYWVEEFD---VDGFRCDV |
10 | 4s1aA | 0.14 | 0.13 | 0.93 | 1.35 | FFAS-3D | | -LQHYVDLANRTEINAYVVDIKDDDGYVGYESNIPAVREIGAWKSKYNVDKVLKTFHDNNIHVIGRLVCFKDPVLSSKKPELAVKSVNGGSWRDNHNLT-------WLDPYNKDSWPYLIEIAKEAV-EKGFDEIQFD- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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