>PF14858 (549 residues) HDLHRRGANTLFNIWIKYKPRLPDWYYNEKLLKVGDSLAQIKEYKLALLQCYGRYLQQFV SVNLDEIIDDVNQFKSTFFPNGFRDKNAALMFHALQERNVCIYQMVCSSDRNLQNQESLQ TCFNILSSLRLTMQVALPQENLCWLIYNGTIHIYMICRHLMMIGHSAKVLEYLLWASICM ESSVPLLSVHYLTWRATLYTAVSQCYYDCQADINGEIFARRGLMKIDELKQLENISSSPG NSETKKIFREATVKMTVMIFKRSVYESRRKPKSYFRPKLRVNLKEAQNLPWPRTVTERLL TEMFDGTASQFLAILEALAYSSRHVLRPAPPVPDEIEIRDVVSELFFAGMEILSGGVSSA GTQGRHCTDHFVISASSTLLQLILTGENAVSGDAAVKFVKLAFSYEEWDVFDSSIGLVIN FLQAQDDPRWKKAEMELKLLTVMQPLVFPKQLKYGFSVNESNTREAVMPYGSGKKHTLRK GSVKHGEPSDDLIILATTVFSCICTSKQNLQPDKEILVDVITFLWQKCKAGLQRIQMSGS DYLKYIHKY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | HDLHRRGANTLFNIWIKYKPRLPDWYYNEKLLKVGDSLAQIKEYKLALLQCYGRYLQQFVSVNLDEIIDDVNQFKSTFFPNGFRDKNAALMFHALQERNVCIYQMVCSSDRNLQNQESLQTCFNILSSLRLTMQVALPQENLCWLIYNGTIHIYMICRHLMMIGHSAKVLEYLLWASICMESSVPLLSVHYLTWRATLYTAVSQCYYDCQADINGEIFARRGLMKIDELKQLENISSSPGNSETKKIFREATVKMTVMIFKRSVYESRRKPKSYFRPKLRVNLKEAQNLPWPRTVTERLLTEMFDGTASQFLAILEALAYSSRHVLRPAPPVPDEIEIRDVVSELFFAGMEILSGGVSSAGTQGRHCTDHFVISASSTLLQLILTGENAVSGDAAVKFVKLAFSYEEWDVFDSSIGLVINFLQAQDDPRWKKAEMELKLLTVMQPLVFPKQLKYGFSVNESNTREAVMPYGSGKKHTLRKGSVKHGEPSDDLIILATTVFSCICTSKQNLQPDKEILVDVITFLWQKCKAGLQRIQMSGSDYLKYIHKY | |||||||||||||||||||
1 | 4xdnA | 0.11 | 0.10 | 0.86 | 1.28 | FFAS-3D | YGLMNMSIQMFQLLKTKC--TLSVLEDSKVTFEMVELLIQFDLAELYISSLKERLQTHQSDTDLVEEIDSKFHYKIALRNVNLQDELYQNWASVFQ---YVGVMLCIKLKQHRRVKTSFHGLLSNLCYVNYLLNERFPIPEDALQELYAWKLALEMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTMIFHYKELKNILLLLQSVSYIVNEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKSILEFCEFYKVQTLLKGAVVLGPSPGRLLQAMKVQFEGGGAVEEYTRLAQSGGTSSEVKMISLLNCYTVQAARVSRCS--GDKQGELVEQCNKVWLQVEKLL---------------------QETDLQFNPI-------WECTVTILWLFSHFEPFAEYVSKLREFYSSNKFVNRFKLKKALLLQILVNYLGGRMLEHD-------------------------------------LGEIYAISAKCFDMC-----RQQGGMRK-VQYVIGIWHLMNCTVKDVALTNAKLEALVKQ- | |||||||||||||
2 | 4gmxC | 0.10 | 0.08 | 0.81 | 1.42 | CNFpred | IQLYKSEREVLVYLTHL-----NVIDTEEIMISKLARQID-WHNINTLSWAIGSISGTMSEDTEKRFVVVIKDLLDLCV---KRGKDNKAVVASDIMYVVGQYPRFLKA--------HWNFLRTVILKLFEFMHE--THEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQ---PQQVHTFYKACGIIISEEERNRLLSDLMQLPNMAWDTIVEQSTANP------DSETVKIIANIIKTNVAVCTSMGA---------------------------DFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKAR---------NLDDVVKVLVEPLLNAVLEDY-DARDAEVLNCMTTVVEK-VILILQSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEKS--------------------------FAAFLE-------LPPAAFKLFVDAICWAFK-------HNNRDVEVNGLQIALDLVKNIERMGN-VPFANEFHKNY | |||||||||||||
3 | 3sf4A | 0.08 | 0.05 | 0.61 | 0.72 | DisCoVER | -----ASCLEL--------------------ALEGERLCKSGDCRAGVS-FF--EA--AVQV----G---T--------------EDLKTLSAIYSQLGNAYFYL--------------HDYAKALEYHHHDLTLARTIG-DQLGEAKASGNLGNTLKVL-----G--NFDEAIVCCQRHLDISRELKVGEARALYNLGNVYHAKGKSFEEVRDALQAAVDFYEENLSL--------------VTALDRAAQGRAFGNLGNTHYL-----------------------LGNFRDAVI-AHEQRLGDKAAERRAYSNLGNAY----I---------FLG-EFE-TASEYYKKTLL--LAR---------------QLKDRA---------VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELN---DRIGEGRACWSLGNA-YTAL------------------------------------GNHDQAMH-FAEKHLEISR-----EVGDKSGELTARLNLSDLQMVL------------------ | |||||||||||||
4 | 2gtqA | 0.06 | 0.04 | 0.69 | 0.67 | DEthreader | SLQEFNGAIFNKFVLAATDTDFEGIESVVGHEFHTGNTCRDWFQL--S---------------LKEGLTVFRDQEFSGRAVRRIENRLLYTTVYEKGAEVVAVTCDDFRA--D-GINLDQFALWYSQ-GT--------------------VPPTPDTDKQP----LLTEAEQ---------------------LLRGFSAPVH-LN-YPYSDDDLLLLLAHDS--D-------------------------A-FTRWEAAQTLYRRAV----AANLATLSDGV-EL-PKHEKLLAAVEKVISDDLDNAFKALLLGVPSEAELWD-----DPLRYHQAREALLDTLAVFLPKWHELNRQAAKQENQ-R-VLADHIETVAEKYGEAQ-N--THEWGILSAVNGN---ES-DTRNRLLAQFADKFSDDA----L-VDKYFAL--VG--SSR--RSDTLQQVRTALQH---------------------P-FHAEDGSGYRFIADK------EI--FNPQVAARLVQA-FNLCNK-LE---------HRKNL- | |||||||||||||
5 | 4a1sA | 0.11 | 0.07 | 0.63 | 0.54 | CEthreader | ---------------------------------------------------------------------------------------GSSMCLELALEGERLCNA--------------GDCRAGVAFFQAAIQAGTEDLRTL------SAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM------NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLG-------------DRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIE------HHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGD-RIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAGGGGGGGGGGGGGGGG---------------------------------------------------------------------- | |||||||||||||
6 | 4ui9O | 0.07 | 0.06 | 0.81 | 0.97 | EigenThreader | GYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDS----YVLLEHSVKKAVHFGL--------PYLASLGIQSLVQQRAFAGKT------ANKLMDALKDSDLLHWKHSL-------SELIDISIAQKTAIWRLYGRSTMALQQAQMLLSM--NSLEQQNN--TESFAVALCHLAELHAEQGCFAAASEVLKHLKERF----------PPNSQH---------AQLWMLCDQKIQFDRAMNDGK--YHLADSLVTGITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKN-----------TEMVISVLLSVAELYWRSSS------------------------------PTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGI--PEQALSLLHMAIEPILADGAI--------LDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCK------ERIRDVVYFQARLYHTLGQERNRCAMLFRQLHQEL | |||||||||||||
7 | 6gmhQ | 0.10 | 0.09 | 0.82 | 0.47 | HHpred | ------QAESCYQLAQYYYQQFASSSFVLPFFGLGQMYIYRGDKENAS-QCFEKVLKAYP-NNYET-----MKILGSLYAASEDQEK--------RDIAKGHLKKVTEQYPDDDIQGALSAYGTATRILQEKVQADVPPE-----------ILNNVGALHFRLGNLGEAKKYFLASLDRAKAEA-EHDEHYYAISVTTSYNLARLYEAMCEFHEAEKLYKNILREVDRLGAMARDKG--NFYEASDWFKEALQIPDAWSL-IGNLHLAKQE---WGPGQK-K-------------FERILKQPSTQSDTYMLAWLQTLHQPTRDR-------EKEKRHQDRALAIYKQVLR-------NDAKNLYALAHKGYFREARDVFAQVREATADIS-DVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTE---------VVLYLARALFKCGKL-------QECKQ-----TLLKARHVAPS------DTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELEL-AHRYFSYLSKLAATEARQC--- | |||||||||||||
8 | 6gmhQ | 0.10 | 0.07 | 0.76 | 0.43 | MRFsearch | -GVEAMQAESCYQLARSFHVDQAFQYYYQAFFGLGQMYIYRGDKENA-SQCFEKVLKAYASEDQEKRDIAKGHLKKVTE-----DVEAWIELAQILEQTD--------------IQGALSAYGTATRILQEKVQADV-----------PPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHLRLGAMARDK--GNFYEASDWFKEAWSLIGNLHLAKQE----------------------------WGPGQKKFERILKQSDTYSMLALGNVWLQT--------DREKEKRHQDRALAIYKQGIGAVLAHK-------------GYFREARDVFAQVREATAD-ISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLLQECKQTLLKARHVAP--------------------------------------SDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELARQCSDLLSQAQYH----------- | |||||||||||||
9 | 5o9zG | 0.10 | 0.09 | 0.91 | 1.28 | FFAS-3D | -----KKARLLLKSVRETNPHHP-----PAWIASARLEEVTGKLQVAR-NLIMKGTEMCPKSRLQPGDTAKAVVAQAVLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAEEPEDARIMLSRAVECCPTS--------------VELWLALARLETYENARK-------VLNKARE-----NIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSIQDAEECDRAGSV---ATCQAVMRAVIGECARAIYAYAL---QVFPS---KKSVWLRAAYFEKNHGTRESLEALLQRAVPKAEVLWLMGAKSKWLAGDLAFQANPNSEEILAAVKLESENYERARRLLAKARSSAPTARKLEWVQDNIRAAQDLCEEALRHYED-FPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEERARAILEKSRLKNPKNPGLWLESVRLEYR-AGLKNIANTLMAKALQECPNSGILWSEAIFLERTKSVDALKKCEHDPHVLLAVAKLFWTKAREWFHRTVKIDSDLGDAWAFF | |||||||||||||
10 | 6tc0C | 0.09 | 0.08 | 0.96 | 0.86 | SPARKS-K | DSEILSAKLDSLQTLNACCAVYGQKELKPSLWASIRREVFQERVEAEGLAALHSLTACLSCSVGSFLSNILQDCRHHLCEP--DMKLVWPSAKLLQAAAGASLPLLLEQFHKHSQSNQRRTILEMILGFLKLQQKWSYEDRD-----EFKDQLCSLVFMALTDPSQLVGIRTLTVLGAQDLELAVGHLYRLTFCRVAALEASGTLATLAEECSRHFRCLQALSAVLPLLLQHLCQANKGNMVTESSEVVAVCQSLQQVAEKCQSYWYFHKT---AVPCLFALAVQASMPLLEDEALASVIGTATELAAQSVTCIVPLFLDGNTSFLPFQPFQDGSSGQRRLV-ALLTAFVCSLPRNVEIP----------QLNRLMRELLKQSCGHSCFSSTAATKCFAGLLNKQPPGQQLEEFLQLAVGTVEAGASESSDQAFTLLLWVTKALVLRYHPLSACLTTRDPELGCASDCTDVLTRAGH---ADVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVLNLLPELPTLLSLLLEALSCPDSVVQLS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |