>PF14855 (187 residues) MNRATIGFYLAVVLGSCSMNGVSQADELLTRDDFFVADESRHQWVTEHNGRTGALNVKGA LVSSPCILDTPEVNFPLQKDKGRYVLNLKVSRCGDGHSDIPERQSTEHGNIVVKQSAVLK TGKDQILLSAWRNGGLSRKNLQHGDNQITYYINEAQYQKIAKTQMPVTAHKTSDSNRGVM HLNIMYE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MNRATIGFYLAVVLGSCSMNGVSQADELLTRDDFFVADESRHQWVTEHNGRTGALNVKGALVSSPCILDTPEVNFPLQKDKGRYVLNLKVSRCGDGHSDIPERQSTEHGNIVVKQSAVLKTGKDQILLSAWRNGGLSRKNLQHGDNQITYYINEAQYQKIAKTQMPVTAHKTSDSNRGVMHLNIMYE | |||||||||||||||||||
1 | 6erjB | 0.11 | 0.07 | 0.64 | 0.96 | DisCoVER | ------------------------VSVSGG-----------------------TIHFEGKLVACAVSSADQTVTLGIGDTTAQVPFSIVLNDCDPKVAATA---------AVAFSGLAVSSTATGVGIEIKPDGASAKQALVEGTNTLRFTAR--YK-AT-------AAATTPGQANADATFIMKY- | |||||||||||||
2 | 3eifA | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | PDYGLGNIK--DI-LAKKVLSSATALYYFSPRQQGAGAVDAK----------------KA-AATMYVTDKDNVHLNNV--SDKFEVTVTVHNKSDKPQE-----------LYYQATVQTDKHFAAPKA-L-YET-SW-QKITIPSKQVTVPID---ASRFSKDL----------GYFLEGFVRFKQD | |||||||||||||
3 | 6jxgA2 | 0.08 | 0.05 | 0.58 | 0.89 | CEthreader | ---------------------------------------------------------------TTFQYSQLTAKYSDTLYDIVATVTAKVTNSG-------------TVSGAEVAQLYIGLPGSAPASPPKQLRGFDKISLKPGKGTVTFNLR---RKDLSYWDTASAQWVTPTSGEFSLYVGASSR | |||||||||||||
4 | 2qksA2 | 0.09 | 0.06 | 0.67 | 0.73 | EigenThreader | ----------------KKRQRFVDKNGRCN----------------VQHGN--------KKRAETLMFSEHAVISMRDG---KLTLMFRVGNLRNS-----------HMVSAQIRCKLLKSPEGEFLLDQLELDVGFDQLFLVSPLTICHVIDAKS-------PFYDLSQRSMQTEQFEVVVILEGI | |||||||||||||
5 | 2j2zB | 0.12 | 0.07 | 0.65 | 0.68 | HHpred | -----------------------------------------------------RAAFHGEVVRPACTLAMEDAWQIIDMGEPERKFSLRLRNCEFNSQGGFDGVRGETPDKFNLSGLQIADVRGNIARAGKVMP---AIPLTGNEEALDYTLR------IVRN----GKKLEAGNYFAVLGFRVDYE | |||||||||||||
6 | 5n2bA | 0.14 | 0.09 | 0.62 | 0.72 | MRFsearch | --------------------------------------------------TTGTINFTGSITDVPCEIDTTSSNVTVGSTTGTTAFKIVLKNCSGATVRFMGTTDSANPAALQTVALQLVDDTGTPISIGSS---SKAYTIAEGDNTFNFAARYIA-----------------GAANATAVFALTY- | |||||||||||||
7 | 6erjB | 0.15 | 0.10 | 0.66 | 0.58 | FFAS-3D | ------------------------------------------------SVSGGTIHFEGKLVNAACAVSTKSVTLAIGDTTAQVPFSIVLNDCDPKVAASSADNSTTATGVGIEILD-----NTSSPLKPDGATFSAKQALVEGTNTLRFTA----------RYKATAAATTPGQANADATFIMKYE | |||||||||||||
8 | 6erjB | 0.15 | 0.11 | 0.70 | 0.63 | SPARKS-K | ---------------------------------------------TPVSVSGGTIHFEGKLVNAACAVSTKSADFTAIGDTAQVPFSIVLNDCDPKVAATGQADNTNTNLLAVSVGIEILDNTSSPLKPDGATFSAK-QALVEGTNTLRFTARYKAT----------AAATTPGQANADATFIMKYE | |||||||||||||
9 | 6hpdA | 0.11 | 0.08 | 0.71 | 0.78 | CNFpred | -------LVWNHEHWHPTHGGIYRNVFLHTMDPLHITLPTVGTYVYAENEKSADITVETEIQNEH--------------ENKNITLVTQIVDN-DGAVVAHSNKNVAIQKMKVTTVTNIQNP--QLWYTRYPY-----------MYKVVSAIKES--------------------NKVIDTYESPLG | |||||||||||||
10 | 6ku5A | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | -TQRTHSEHLQELEATS----NDGK-LIWKIE--D--------NKSEHPPCL-SSVPFHTGPCGYKMASK-VYLNGRGT---HLSLYVVLMVGD-FDALL------PWPFRQTVALSVLDQ-SGA-GNH-QS-LS-FKPDFQRPNVAVGFSCF--IPIKLEEPTYVK--E-DT-M---FVKVKVDMV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |