Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | ISHHQTDNNETEKKGLDEKIRKLKMEMAYLRAADVKILNQLLALHEGIEAVKWLLEERGALTSRCSSLTSSQYSLGEGPDTSWRGSWSSLQDPHDKLDNISIGSYLDTLADDLDEY |
1 | 3k5bA | 0.06 | 0.05 | 0.87 | 1.17 | DEthreader | | QEAEAKAEAVKREAEEKAKALLQARERALEAQYRAALRRAESAGELLVATARTQARGEVLEEVRRRVREALEALPQKEWPHLEARVELQAVGAEGKTQVEN--------------- |
2 | 3lg8A | 0.07 | 0.03 | 0.47 | 0.65 | DisCoVER | | -------------------KDKLIKLIKDGAISL---------GG-------------------GELIVRLNKTVLKKGEPVDIAGG-CIIETADGL----KS-LD--NS------ |
3 | 5fx8A | 0.07 | 0.06 | 0.82 | 1.00 | DEthreader | | ALRDAR--LATPLDDKDDWLLAKIMFNNNDLFYSQMYHVLFHTIPEIVHEAAFRTLSYENWILRR-QLVDVHVAW-----ITG-GAHH-V----M------Q-GSPVKSGVLPAPN |
4 | 2w6dA2 | 0.07 | 0.07 | 1.00 | 0.54 | CEthreader | | SGKREAFNAALQKAFEQYITDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQITDQITEKLTGKDVEDNSPGWAKWAMGLLSLSKGNLAGFALAGAGFDWKNILLNYFTVIGIG |
5 | 2p22C | 0.07 | 0.07 | 1.00 | 0.50 | EigenThreader | | EGINLLSSKEIIDLIQTHRHQLELYVTKFNDFAGKIHAFRDQFKQLEESKYVASWQDYHSEFSKKYGDIALKKKLEQNTKKLDEESSQLETTTKNYLDIRTQYHLRREKLATWDKQ |
6 | 5ed9A | 0.20 | 0.09 | 0.44 | 0.41 | HHpred | | --------SVKELGRLEAQLASLRQELAALTLKQNSVADEVGLLPQKIQAARADVESQF--------------------------------------------------------- |
7 | 6epcK | 0.16 | 0.09 | 0.55 | 0.35 | MRFsearch | | ---------PEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQS-------------------------------------IPLVIGQFLEAVD------ |
8 | 5xy3h | 0.09 | 0.07 | 0.77 | 0.56 | FFAS-3D | | -HLKGKELIKKTRQELLDELAGLEKKLFELKGQKAASLTEIKNTRRDVARVKSILMVSQRKALQ-EKYAKAKLVPIDLRKHQEKSLRNKLA------------------------- |
9 | 4xngA | 0.19 | 0.18 | 0.97 | 0.68 | SPARKS-K | | ---FHNFSKETLQKQAKRGFLLLERSLVGLQQLELEYVNLLGQKTELLNNLKELVDEHFSDTEKIINTLEKIFDVGGSEYTPVLNSNKLLSDPDPQ-REIGLRQFIITLRQRFKKL |
10 | 4k1pA | 0.12 | 0.09 | 0.82 | 0.47 | CNFpred | | ------------QKELLPLIQKLSAEATQITFVEDQVSSFTELIDRQITTLETLLTDWKVLNNNMIQIQKNVEEGTYTDSSLLQKHFNQIK---------KVSDEMNKQTNQFEDY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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