>PF14816 (352 residues) TSGGSESYINSLDYLLQEKREQAQEQEREKLLLQDCPDLNSLDLNEDEVPLTPEHRMLVE RFSVSLQVIPPVHPGETVFLPRCHPLPCILDSAHLKPRSHLEGLFLSSPPAQQLSFLRSG LLSNLYLHTHNCPVPVLQWLFQLLTWPPETSLGAFGLLWDLSVDGLFCQSDEDVHLWCPS LQEVKEVFHSLGAHSPALYPQGPFQHRGRELKREVSLSGSEQQDTPQETALDISLSYIYK FLTLCALAQPGAYTDANLLVLIELLCRAGLDMGLRLLPKTDLQQLLLLLLENIQEWPGKL RQLCCALSWVSDHHHNLLALVQFFLDVTPRGRQLRSQLSLVVIARMLGQQET |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TSGGSESYINSLDYLLQEKREQAQEQEREKLLLQDCPDLNSLDLNEDEVPLTPEHRMLVERFSVSLQVIPPVHPGETVFLPRCHPLPCILDSAHLKPRSHLEGLFLSSPPAQQLSFLRSGLLSNLYLHTHNCPVPVLQWLFQLLTWPPETSLGAFGLLWDLSVDGLFCQSDEDVHLWCPSLQEVKEVFHSLGAHSPALYPQGPFQHRGRELKREVSLSGSEQQDTPQETALDISLSYIYKFLTLCALAQPGAYTDANLLVLIELLCRAGLDMGLRLLPKTDLQQLLLLLLENIQEWPGKLRQLCCALSWVSDHHHNLLALVQFFLDVTPRGRQLRSQLSLVVIARMLGQQET | |||||||||||||||||||
1 | 5z8hA | 0.07 | 0.05 | 0.70 | 0.71 | DisCoVER | -------------------------------------------------------------------------------------------MLLLEQIRAYCETCWEWEPNPM--PPVICAVCVLMSLGLQAIAELLQVDCEMYLTN---DHYSITLRRYAGMALTNLTFNKATLCSKGCMRALVAQLKSLQQIASVLRNLSWADSKKTLREVGSVALMECALE---VKKESTLKSV-LSALWNLSAHNKADIC--AVDGALAFLVGTLTYRSTLAIIE-SGGGILRNVSSLLSHSLTIVSNACGTLWNLSQLWMGAVSMLKNLIHS--KHKMIAMGSA-AALRNLMANRP- | |||||||||||||
2 | 3rkoM | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | -WERVKVPRWIALITMG-LTLALSLQLWLQGGYSLTQSAGIPQWSEFDMHLAIDSLLMVVLTGLL-----------------------------GVLAVLCSW----------------------YQGFFHLNLMWILGGVIGVFAIDFLFFFFWEMMLVPMY--FL-ALWTRITAATKFFIYTQASGLVMLIAI---------------------L-ALVFVHYWTFNYLELLMLGFFIAFAVPVVPLHGWLPAGLLKTAAYGLLRFSLP-LFPNASAEFAPIAMWLGVIGIFYGASHGFVLALAYQGAVI------MILFGSFQVPVITVIST------QQ-FVNSV--- | |||||||||||||
3 | 2z6gA | 0.09 | 0.09 | 0.99 | 0.59 | CEthreader | LNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAI--TTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILAGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVKLLHPPSHWPLIKATVGLIRNLALCPAN | |||||||||||||
4 | 6n1zA | 0.07 | 0.07 | 1.00 | 0.85 | EigenThreader | PVDSDGEVLGFENLVFSIFEFVHALLELIYYIILYMQITDEDDDTFSYTVRIAAQDLLLAVATDFQNESAAALAAAATRHLQEAEQTKNSGTALGSVKAIITDSVKNFDMHGFLTNVLLGRALWAASRFTVAMSQQFLQATVSGLHETQPPSVRISAVRAIWGYCDQLKVSESTHVLQPFLPSILDGLIHLAAQFSCTVDPEFTASMESKICPFTIAIFLKYSNDQIEACQGPMQMRLIPTLVSIMQAPADKIPAGLCATAIDILTTVVRNT-KPPLSQLLICQAFPAVAQCTLHTDDATMQNGGECLRAYVSVTYVMQVVSQLLDPSEFTAAFVGRLVSTLISKAGRELGE | |||||||||||||
5 | 5hiuA | 0.14 | 0.10 | 0.73 | 0.36 | HHpred | ------------------------QADLVAKLKNG-----HLS---ERVLAANKLRFAVVDFPLNP--------VHAIWHAAK-------------------DMIPENPDNARQASWE--LLIECVKYP-NSTELERSEYFHTLTGPAHSKFYQLVALEQLTNHGRNIAGFYYLTLWLNQAYRAARDAR-----------------------KLAL-A------R-PASPEDKNLSQLFALVKDVIKFNFKFATDDVIAGLIDMLLKICMLTLVTFIPTNKLKYCIQVLSSIHPSLQKEAWHTISIICRSHHGQSTLLDFLRSYSPNPDDTVRD-VRGALSVLQKLLRKTAE | |||||||||||||
6 | 3a6pA1 | 0.10 | 0.07 | 0.69 | 0.50 | MRFsearch | ------------------DQVNALCEQLVKAVTVMM-----------TQRYRLEALKFCEEFKEKCP-----------------------------ICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNEKVYLKNSVMELIANENHIKDALSRIVVEMIKRE-------WPQHWPDMLIELDTLSKQ----------------------------------------GETQTELVMFILLRLAEDVTLTQNMERIFSFLLNTLQENVNKYQQAQANCRVGVAALNTLAGYIDWVSMSCKLLEILCLLLNEQELQLGAAECLLIKLEDRKPLMVLFGDVAMHYILSA--- | |||||||||||||
7 | 5u1sA1 | 0.09 | 0.09 | 0.97 | 0.83 | FFAS-3D | SIGILAMHNNIIRDFTKIASNIEDITTVDHSLNSIYSLLKSHHMWGHINSTVKQHLMIIVKLGLASSEI------IFLFNETNLFQAHSLKNILLADFSALQIILKRKLVDEYLPHILELFSKRYLLKDPNLKAALTKIVLSFFSVTTSCKVLFGLKFLQYISKNLLHKNYLEMGPNKIYLNSFYLSYSMLYDGLDKIMLLDILSYEETTEEYCNMSENRLLWSCISVDDLNVILEKCLVCLWSTIRLEGLPKNKDILRQFTVIYINSNIKSINDESAAALLSELLGVLSEICIDYKSNIISVLFNASVLFKSHSFLLKTANLISNDSKTSHRTILKFKIEIFSCLFN---- | |||||||||||||
8 | 6z2wE | 0.11 | 0.10 | 0.93 | 0.73 | SPARKS-K | QSQKLPVVKENLVIAWTQLTLTTSNDVFDTLLLKLIDIFNS-----DDYSLRIMMTLQIKNMAKILKK--TP---YQLLSPILPVLLRQLGK-NLVERKVGFQNLIEYSSKTILDIFQRYIIPYAIIQYKS---DVLSEIAKIMCDGNQMKVNLLQIFAVALVKHGLLNRAPTFDKGYINANMILCSLRFLITNFEKDKRHG---------SKYKNINNWTDDQEQAQKKLQDNILGIFQVFSSDIHDVEGRTTYYEKLRVINGISFLIIPKKSIISALAQISICLQTGLGL-KEVRYEAFRCWHLLVRHLNDDSLIAFILQKWSEFNNIVYSILDTLIKYTTLALVGKPEL | |||||||||||||
9 | 3m1iC | 0.10 | 0.08 | 0.82 | 0.99 | CNFpred | ---------NILELLSTKFMTSPDTRAITLKCLTEVSNLKIPQDN------DLIKRQTVLFFQNTLQQIA---------------------TSVMPVTADLKATYANADQSFLQDLALTTYLARNRALLRELLLNAHQYLIQLSKIERELFKTTLDYWHNLVADLFYE-----PLKKHIYEEICSQLRLVIIE--NMVRPEEVLVVEGEIVREFV-----------KESDTIQLYKSEREVLVYLTHLN-----VIDTEEIMISKLARQIDGSE--WSWHNINTLSWAIGSIS-TEKRFVVTVIKDLLDLTNKAVVASDIMYVVGQYPRFLKAHFLRTVILKLFEFMHETHE | |||||||||||||
10 | 5y81A | 0.08 | 0.05 | 0.72 | 1.00 | DEthreader | ---------------IY-DYVNFVPDLIIRLLQDC------------------------------------------------------------DYLFDERILIGNG-HETLRPLAY-STVADFIHNIEEIEKTIKIYTGYLLDSLALTVQIMSAKLLLNLVERILKL-GKPAKLMIIIDSYMNRFKTL-NRQYD--------T----IMKYYGRYETHKETNDPIKDAFYLYRTLMSFLKTIIHDLKVFNEEVIVFKDLFHECIIGLKF-FSATKDARELMDYLAFMFMQAT-F-NEI-IEQELPFVYERMLGLLHVAQSFLTSEITFAGIL-LRFLKGKLKDLTS--L- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |