>PF14808 (256 residues) LDWMYGGVDPMFEGNGGPECAAFLSPRQRIFETLIIVFFSILEVVVAIKKINVPKEVRDV RKDGRRSKEDTWGKNLLLVALCMTFGVEVGFKFATKTVIYLLNPCHVVTMVQIFLLACPP CKTAMVIFRLQVHMLNGALLALLFPVVNTRLLPFEKEIYYIQHSMLYLVPVYLFRKGGVY KPEPLRDMWWALLSTGILFLYHFVFLQGLGMLTEVNLNNMLCPAVSDPFYGPWYRVWATG HQTALTLLHGKALTIL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LDWMYGGVDPMFEGNGGPECAAFLSPRQRIFETLIIVFFSILEVVVAIKKINVPKEVRDVRKDGRRSKEDTWGKNLLLVALCMTFGVEVGFKFATKTVIYLLNPCHVVTMVQIFLLACPPCKTAMVIFRLQVHMLNGALLALLFPVVNTRLLPFEKEIYYIQHSMLYLVPVYLFRKGGVYKPEPLRDMWWALLSTGILFLYHFVFLQGLGMLTEVNLNNMLCPAVSDPFYGPWYRVWATGHQTALTLLHGKALTIL | |||||||||||||||||||
1 | 4ikvA1 | 0.05 | 0.04 | 0.84 | 0.71 | DisCoVER | ---ASIDKQI-AASVPQRPKGLFT----L--FF--TE-FWERFSYYGMRAILVY--YMYYEVGGLGLDEALAIMSIYGALVYMSGIIGGWLAD---RVFGTSRAVFYGGLIMAGHIALGVAALFVSMALIVLGTGLLKPNVSSIVGDMYKPGDDRRDAGFSIFYMGIN---LGAFLAPLVVGTAGMYNFHLGFGLAAVGM-FLGLVV------F-VATRKKNLGLAGTYVPNPLTPAEKKKAAAI----------- | |||||||||||||
2 | 4a01A | 0.06 | 0.04 | 0.77 | 0.83 | DEthreader | AGVGAF-----------KV-EDVADNVGDNVDIAGMGSDLFGSYAESSCAALVAISSFG--E--AY-------GILVCLLTTLFATDF-FEI-KAVKEIEPALKKQLVISTVLMTGVVSALSLFLCVAVGLWAGLIIGFVTEYY-SNAY-------------------------------TFAAMYGIAVAALGMLSTIATGLAIDAYGPISATLAGNTTAGDNAK-GDGDPLKDTSGPSLNILIKLMAVESLVFA | |||||||||||||
3 | 4ikvA1 | 0.07 | 0.07 | 0.96 | 0.57 | CEthreader | -------ASIDKQQIAASVPQRGFFGHPKGLFTLFFTEFWERFSYYGMRAI-LVYYMYYEVSKGGLGLDEHLALAIMSIYGALVYMSGIIGGWLADRVFGTSRAVFYGGLLIMAGHIAAALFVSMALIVLGTGLLKPNVSSIVGDMYKPGDDRRDAGFSIFYMGINLGAFLAPLVVGTAGMKYNFHLGFGLAAVGMFLGLVVFVATRKKNLGLAGTYVPNPLTPAEKKKAAAIMAVGAVVIAVLLAILIPNGWF-- | |||||||||||||
4 | 6xbdG | 0.07 | 0.05 | 0.77 | 0.65 | EigenThreader | ---------NALASLGHKGIKTLRTFGRAGLMLFNAL--------------------------VGKPEFRKH-----------APLLVRQLYNVGVLS----MIVVSGVFIGMVLGLTAETSLGMLVALSLLRGPVVAALLFAGLMRATEQLSSMEMAGVISLPLLTVGGSLVGVSWKGIDVDWR----MDLVNCLIKSVVFAITVTWIS-----LFNGYDAIPTGISRATTRTVVHSSLAVLGLDFVLTALMFG- | |||||||||||||
5 | 2wwbA2 | 0.12 | 0.07 | 0.60 | 0.24 | HHpred | ----------------------------------------------------------------------------ISLFIATNICETIVWKAFSPTTVNTGR---------------GMEFEGA---------IIALFHLLATRDKREARQNLPNLMNLIATIFVFAVVIYFQGF-RVDLPIYTSNIPI-ILQSALVSNLYVIS-QMLSARFSGNLCHYLSPPESFSVLDPVHAVVYIVFMLGSCAFFSKTWIEV | |||||||||||||
6 | 6ko5A | 0.09 | 0.07 | 0.83 | 0.38 | MRFsearch | -----------------AYIQKYLPAPLLAGVTATCVALFVVGIMLVVSRF---------------RELRTTTNLYLSLLIFLCMPLDLVRLWQYRPWNFGDLLCKLFQFVSESCTYATKGRVKLVIFVIWAVAFCSAGPIFVLVGVEFAVRSGLLTVMVWVSSIFFFLPVFCLTVLYSLRDQNHKQTVKMLAVVVFAFILCWLPFHVGRYLFSKSF-----------EPSQYCNLVSFVLFYLSAAINPILYNIM | |||||||||||||
7 | 4jr8A | 0.12 | 0.09 | 0.80 | 0.91 | FFAS-3D | --------------EGEAIWLW-----------LGTAGMFLGMLYFIARGWGETDSRRQK--------------FYIATILITAIAFVNYLAMALGFGWLFTTP---LLLYDLGLLAGADRNTISSLVSLDVLMIGTGLVATLSAGSGVLSAGAERLVWWGISTAFLLVLLYFLFSSLSGRVADLPSDTRSTFKTLRNLVTVVWLVYPVWWLVG---------TEGIGLVGIGIETAGFMVIDLVAKVGFGIILLR | |||||||||||||
8 | 5y78A | 0.10 | 0.09 | 0.89 | 0.81 | SPARKS-K | ----------------SPTLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWKYPLYCTFLWVLGLRTKPNKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSATFTWTGFITAMNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNV----------SP--VSFSIGNTIKRVIIIFGSILVF | |||||||||||||
9 | 3rkoB | 0.10 | 0.08 | 0.80 | 1.26 | CNFpred | ----------------------------SLTMLSVVTGVGFLIHMYASWYMR-----------------EEGYSRFFAYTNLFIASMVVLVLAD--NLLLMYLGWEGVGLCSYLLIGFY-NNMLMWATLMLLGGAVGKSAQTWLADAMA--GPTPVSALIHAATMVTAGVYLIARTHGLFL--MTPEVLHLVGIVGAVTLLLAGFAAVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILA | |||||||||||||
10 | 1jk0A | 0.05 | 0.04 | 0.79 | 1.00 | DEthreader | --------------------LN-KELETLREENRVKSDMLKEKLSKDAENHYLHRKLKEMEKELNEVQIPEKSFYGFQIMIENIHSETYSLLIDTYIKSLFIH---IK--A---I---LFGERLVAFASIEGVFFSGSFASIFWLKKRGM-MPGLTFSNELICRDEGLHTDFACLLFAHLNKPDPAIEKIVTEAVEIEQRYFLDALP-----------VALLGM---------NADLMN-QYVEFVADRLLVAFGN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |